Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2889 |
Symbol | |
ID | 6065335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3147081 |
End bp | 3148151 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641602294 |
Product | lambda integrase |
Protein accession | YP_001725843 |
Protein GI | 170020889 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00939202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0727877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGAA GGCGAAGTCA TGAGCGCCGG GATTTACCCC CTAACCTTTA TATAAGAAAC AATGGATATT ACTGCTACAG GGACCCAAGG ACGGGTAAAG AGTTTGGATT AGGCCGAGAC AGGCGAATCG CAATCACTGA AGCTATACAG GCCAACATTG AGTTATTTTC AGGACACAAA CACAAGCCTC TGACAGCGAG AATCAACAGT GATAATTCCG TTACGTTACA TTCATGGCTT GATCGCTACG AAAAAATCCT GGCCAGCAGA GGAATCAAGC AGAAGACACT CATAAATTAC ATGAGCAAAA TTAAAGCAAT AAGGAGGGGT CTGCCTGATG CTCCACTTGA AGACATCACC ACAAAAGAAA TTGCGGCAAT GCTCAATGGA TACATAGACG AGGGAAAGGC GGCATCAGCC AAGTTAATCA GATCAACACT GAGCGATGCA TTCCGAGAGG CTATGGCTGA AGGCCATATA ACAACAAACC CGGTCGCAGC CACTCGCGCT GCAAAATCAG AGGTAAGGAG ATCAAGACTT ACGGCTGACG AATACCTGAA AATTTATCAA GCAGCAGAAT CATCACCATG TTGGCTTAGA CTTGCAATGG AACTGGCTGT TGTTACCGGG CAGCGAGTTG GTGATTTATG CGAAATGAAG TGGTCTGATA TCGTAGATGG ATATCTTTAT GTCGAGCAAA GCAAAACAGG CGTAAAAATT GCCATCCCAA CAACATTGCA TGTTGATGCT CTCGGGATAT CAATGAAGGA AACACTTGAT AAATGCAAAA AGATTCTTGG CGGAGAAACC ATAATTGCAT CTACTCGTCG TGAACCGCTT TCATCCGGCA CAGTATCAAG GTATTTTATG CGCGCACGAA AAGCATCAGG TCTCTCCTTC GAAGGGGATC CGCCAACCTT TCACGAGTTG CGCAGTTTGT CTGCAAGACT CTATGAGAAG CAGATAAGCG ATAAATTTGC TCAACATCTT CTCGGGCATA AGTCGGACAC CATGGCATCA CAGTATCGTG ATGACAGAGG CAGGGAGTGG GACAAAATTG AAATCAAATA A
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Protein sequence | MGRRRSHERR DLPPNLYIRN NGYYCYRDPR TGKEFGLGRD RRIAITEAIQ ANIELFSGHK HKPLTARINS DNSVTLHSWL DRYEKILASR GIKQKTLINY MSKIKAIRRG LPDAPLEDIT TKEIAAMLNG YIDEGKAASA KLIRSTLSDA FREAMAEGHI TTNPVAATRA AKSEVRRSRL TADEYLKIYQ AAESSPCWLR LAMELAVVTG QRVGDLCEMK WSDIVDGYLY VEQSKTGVKI AIPTTLHVDA LGISMKETLD KCKKILGGET IIASTRREPL SSGTVSRYFM RARKASGLSF EGDPPTFHEL RSLSARLYEK QISDKFAQHL LGHKSDTMAS QYRDDRGREW DKIEIK
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