Gene EcolC_2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2855 
Symbol 
ID6065197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3123902 
End bp3124858 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content52% 
IMG OID641602261 
Producthypothetical protein 
Protein accessionYP_001725810 
Protein GI170020856 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00195846 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTAAAT CACACCCGCG CTGGCGCTTA GCAAAGAAGA TCCTCACCTG GCTATTTTTT 
ATCGCGGTGA TTGTGTTGCT GGTGGTCTAC GCCAAAAAAG TGGACTGGGA AGAGGTCTGG
AAGGTCATCC GCGACTACAA TCGCGTTGCG CTGCTTAGTG CGGTCGGGCT GGTGGTCGTC
AGCTATCTGA TTTACGGCTG CTATGACCTG CTCGCCCGCT TTTACTGCGG TCACAAACTG
GCGAAGCGCC AGGTGATGCT GGTGTCGTTT ATCTGCTACG CCTTCAACCT GACGCTCAGT
ACCTGGGTCG GCGGCATTGG TATGCGCTAT CGTTTGTACT CTCGTCTGGG GTTGCCCGGT
AGCACTATTA CGCGGATTTT CTCGCTCAGT ATTACCACCA ACTGGCTGGG CTACATTTTA
CTGGCAGGGA TTATCTTTAC CGCAGGCGTG GTGGAGTTGC CGGATCACTG GTATGTCGAT
CAAACTACGC TGCGTATTCT CGGCATTGGC TTACTGATGA TTATCGCGGT TTATTTGTGG
TTTTGCGCTT TCGCGAAGCA CCGCCATATG ACCATCAAAG GGCAAAAGCT GGTGCTGCCT
TCATGGAAAT TCGCCCTCGC TCAGATGCTG ATTTCCAGCG TTAACTGGAT GGTAATGGGG
GCGATTATCT GGCTGTTACT TGGTCAAAGC GTGAACTATT TCTTTGTACT GGGCGTGTTA
CTGGTTAGTA GTATTGCTGG CGTCATCGTG CATATTCCGG CGGGGATCGG TGTGCTGGAA
GCGGTGTTTA TCGCACTACT GGCTGGGGAG CATACCTCCA AAGGTACAAT TATCGCCGCC
CTACTCGCTT ACCGTGTGCT GTATTACTTT ATCCCACTGC TGCTGGCGCT GATCTGTTAC
CTGTTGCTGG AAAGCCAGGC GAAGAAGCTA CGGGCGAAAA ATGAAGCGGC GATGTGA
 
Protein sequence
MSKSHPRWRL AKKILTWLFF IAVIVLLVVY AKKVDWEEVW KVIRDYNRVA LLSAVGLVVV 
SYLIYGCYDL LARFYCGHKL AKRQVMLVSF ICYAFNLTLS TWVGGIGMRY RLYSRLGLPG
STITRIFSLS ITTNWLGYIL LAGIIFTAGV VELPDHWYVD QTTLRILGIG LLMIIAVYLW
FCAFAKHRHM TIKGQKLVLP SWKFALAQML ISSVNWMVMG AIIWLLLGQS VNYFFVLGVL
LVSSIAGVIV HIPAGIGVLE AVFIALLAGE HTSKGTIIAA LLAYRVLYYF IPLLLALICY
LLLESQAKKL RAKNEAAM