| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2842 |
|---|
| Symbol | |
|---|
| ID | 6065144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3108964 |
|---|
| End bp | 3110049 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641602248 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001725797 |
|---|
| Protein GI | 170020843 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTG GTCATCGCTT TGATGCTCAG ACGCTGCACA GTTTTATTCA GGCTGTATTT
CGTCAGATGG GTAGCGAGGA ACAAGAAGCG AAATTAGTTG CCGATCATTT AATCGCGGCA
AACCTGGCAG GGCATGATTC ACATGGTATT GGCATGATCC CAAGCTATGT ACGCTCCTGG
AGTCAGGGGC ACCTGCAAAT TAACCATCAT GCCAAAACCG TTAAAGAGGC GGGGGCGGCG
GTCACGCTCG ATGGCGATCG CGCATTTGGT CAGGTCGCGG CACATGAAGC GATGGCGCTG
GGGATTGAGA AAGCGCATCA GCACGGTATT GCCGCCGTGG CGCTACATAA CTCGCATCAT
ATCGGCCGTA TCGGTTACTG GGCGGAGCAG TGTGCAGCGG CGGGGTTTGT CTCTATCCAC
TTTGTTAGCG TGGTCGGTAT TCCAATGGTC GCGCCGTTCC ACGGTCGCGA CAGCCGCTTT
GGCACCAATC CGTTCTGTGT GGTTTTCCCT CGTAAAGATA ATTTCCCGCT GTTGCTTGAT
TACGCCACCA GCGCCATTGC ATTTGGCAAA ACCCGCGTCG CCTGGCATAA AGGCGTCCCC
GTGCCGCCAG GTTGCCTGAT TGACGTTAAC GGCGTGCCGA CGACCAATCC GGCGGTAATG
CAGGAGTCGC CGTTGGGTTC GCTGTTGACC TTTGCCGAAC ATAAAGGCTA CGCCCTTGCA
GCGATGTGTG AAATTCTTGG CGGGGCGCTT TCCGGCGGTA AAACGACGCA TCAGGAAACG
TTACAAACCA GTCCCGATGC CATTCTTAAC TGCATGACCA CTATCATCAT CAACCCGGAA
CTCTTCGGCG CGCCGGATTG TAACGCGCAG ACCGAAGCCT TTGCCGAGTG GGTGAAAGCC
TCGCCGCATG ATGATGATAA GCCGATTTTG CTACCGGGCG AGTGGGAAGT GAACACGCGT
CGCGAACGGC AGAAGCAGGG GATTCCACTG GATGCGGGAA GCTGGCAGGC CATTTGTGAT
GCAGCGCGGC AGATTGGTAT GCCGGAAGAG ACGTTGCAGG CTTTCTGTCA GCAGTTAGCC
AGCTAA
|
|---|
| Protein sequence | MESGHRFDAQ TLHSFIQAVF RQMGSEEQEA KLVADHLIAA NLAGHDSHGI GMIPSYVRSW
SQGHLQINHH AKTVKEAGAA VTLDGDRAFG QVAAHEAMAL GIEKAHQHGI AAVALHNSHH
IGRIGYWAEQ CAAAGFVSIH FVSVVGIPMV APFHGRDSRF GTNPFCVVFP RKDNFPLLLD
YATSAIAFGK TRVAWHKGVP VPPGCLIDVN GVPTTNPAVM QESPLGSLLT FAEHKGYALA
AMCEILGGAL SGGKTTHQET LQTSPDAILN CMTTIIINPE LFGAPDCNAQ TEAFAEWVKA
SPHDDDKPIL LPGEWEVNTR RERQKQGIPL DAGSWQAICD AARQIGMPEE TLQAFCQQLA
S
|
|---|
| |