| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2622 |
|---|
| Symbol | |
|---|
| ID | 6065412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2873364 |
|---|
| End bp | 2874071 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641602029 |
|---|
| Product | hydrogenase 1 b-type cytochrome subunit |
|---|
| Protein accession | YP_001725580 |
|---|
| Protein GI | 170020626 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.954449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00890552 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGA AAAGCGACAA CGTTGTCAGC CACTATGTCT TTGAAGCGCC AGTGCGCATC
TGGCACTGGT TGACGGTGTT ATGCATGGCG GTGTTGATGG TCACCGGATA CTTTATCGGC
AAGCCGCTAC CTTCCGTCAG CGGCGAGGCG ACGTATCTGT TCTATATGGG CTACATCAGG
TTAATTCACT TCAGCGCCGG GATGGTTTTT ACCGTGGTTT TGCTGATGCG GATCTACTGG
GCTTTTGTTG GCAATCGATA CTCCCGCGAG CTGTTTATCG TGCCGGTATG GCGTAAAAGC
TGGTGGCAGG GCGTGTGGTA TGAAATCCGC TGGTATCTGT TTCTGGCAAA ACGTCCGAGT
GCCGATATAG GCCATAATCC CATCGCCCAG GCGGCGATGT TCGGCTATTT CCTGATGTCG
GTCTTTATGA TCATCACTGG TTTTGCGCTG TACAGCGAAC ACAGCCAGTA CGCTATTTTT
GCGCCGTTCC GTTATGTGGT GGAATTTTTC TACTGGACGG GTGGCAACTC AATGGACATT
CACAGCTGGC ATCGGCTGGG GATGTGGCTG ATTGGCGCGT TTGTGATCGG TCATGTCTAC
ATGGCGCTGC GTGAAGACAT CATGTCCGAC GACACGGTGA TCTCCACCAT GGTCAACGGC
TACCGTAGCC ACAAATTTGG CAAAATAAGT AACAAGGAGC GTTCATGA
|
|---|
| Protein sequence | MQQKSDNVVS HYVFEAPVRI WHWLTVLCMA VLMVTGYFIG KPLPSVSGEA TYLFYMGYIR
LIHFSAGMVF TVVLLMRIYW AFVGNRYSRE LFIVPVWRKS WWQGVWYEIR WYLFLAKRPS
ADIGHNPIAQ AAMFGYFLMS VFMIITGFAL YSEHSQYAIF APFRYVVEFF YWTGGNSMDI
HSWHRLGMWL IGAFVIGHVY MALREDIMSD DTVISTMVNG YRSHKFGKIS NKERS
|
|---|
| |