Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2416 |
Symbol | hemA |
ID | 6068570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2660637 |
End bp | 2661893 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641601825 |
Product | glutamyl-tRNA reductase |
Protein accession | YP_001725377 |
Protein GI | 170020423 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0373] Glutamyl-tRNA reductase |
TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000119078 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000345051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCTTT TAGCACTCGG TATCAACCAT AAAACGGCAC CTGTATCGCT GCGAGAACGT GTATCGTTTT CGCCGGATAA GCTCGATCAG GCGCTTGACA GCCTGCTTGC GCAGCCGATG GTGCAGGGCG GCGTGGTGCT GTCGACGTGC AACCGCACGG AACTTTATCT TAGCGTTGAA GAGCAGGATA ACCTGCAAGA GGCGTTAATC CGCTGGCTTT GCGATTATCA CAATCTTAAT GAAGAAGATC TGCGTAAAAG CCTCTACTGG CATCAGGATA ACGACGCGGT TAGCCATTTA ATGCGTGTTG CCAGCGGCCT GGATTCATTG GTTCTTGGGG AGCCGCAGAT CCTCGGTCAG GTTAAAAAAG CGTTTGCCGA TTCGCAAAAA GGCCATATGA AGGCCAGCGA ACTGGAACGC ATGTTCCAGA AATCTTTCTC TGTAGCGAAA CGCGTTCGCA CTGAAACAGA TATCGGTGCC AGCGCTGTGT CTGTCGCTTT TGCGGCTTGT ACGCTGGCGC GGCAGATCTT TGAATCGCTC TCTACGGTCA CAGTGTTGCT GGTAGGCGCG GGCGAAACCA TCGAGCTGGT AGCGCGTCAT CTGCGCGAAC ATAAAGTACA GAAGATGATT ATCGCCAACC GCACTCGCGA ACGTGCCCAA ATACTGGCAG ATGAAGTTGG CGCGGAAGTG ATTGCCCTGA GTGAGATCGA CGAACGTCTG CGCGAAGCCG ATATCATCAT CAGTTCCACC GCCAGCCCGT TACCGATTAT CGGGAAAGGC ATGGTGGAGC GCGCATTAAA AAGCCGTCGC AACCAACCAA TGCTGTTGGT GGATATTGCC GTTCCGCGCG ATGTTGAGCC GGAAGTTGGC AAACTGGCGA ATGCTTATCT TTATAGCGTG GACGATCTGC AAAGCATCAT TTCGCACAAC CTGGCGCAGC GTAAAGCCGC AGCGGTTGAG GCGGAAACTA TTGTCGCTCA GGAAACCAGC GAATTTATGG CGTGGCTGCG AGCACAAAGC GCCAGCGAAA CCATTCGCGA GTATCGCAGC CAGGCAGAGC AAGTTCGCGA TGAGTTAACC GCCAAAGCGT TAGCGGCCCT TGAGCAGGGC GGCGACGCGC AAGCCATTAT GCAGGATCTG GCATGGAAAC TGACTAACCG CTTGATCCAT GCGCCAACGA AATCACTTCA ACAGGCCGCC CGTGACGGGG ATAACGAACG CCTGAATATT CTGCGCGACA GCCTCGGGCT GGAGTAG
|
Protein sequence | MTLLALGINH KTAPVSLRER VSFSPDKLDQ ALDSLLAQPM VQGGVVLSTC NRTELYLSVE EQDNLQEALI RWLCDYHNLN EEDLRKSLYW HQDNDAVSHL MRVASGLDSL VLGEPQILGQ VKKAFADSQK GHMKASELER MFQKSFSVAK RVRTETDIGA SAVSVAFAAC TLARQIFESL STVTVLLVGA GETIELVARH LREHKVQKMI IANRTRERAQ ILADEVGAEV IALSEIDERL READIIISST ASPLPIIGKG MVERALKSRR NQPMLLVDIA VPRDVEPEVG KLANAYLYSV DDLQSIISHN LAQRKAAAVE AETIVAQETS EFMAWLRAQS ASETIREYRS QAEQVRDELT AKALAALEQG GDAQAIMQDL AWKLTNRLIH APTKSLQQAA RDGDNERLNI LRDSLGLE
|
| |