Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2316 |
Symbol | |
ID | 6065908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2554736 |
End bp | 2556415 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641601719 |
Product | alpha amylase catalytic region |
Protein accession | YP_001725278 |
Protein GI | 170020324 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.278573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA AAATTACGGA TTACCTGGAC GAAATCTACG GTGGAACATT TACCGCAACT CATTTACAGA AACTTGTAAC GCGTCTTGAG AGTGCGAAAC GATTAATTAC ACAGCGACGT AAAAAACACT GGGATGAAAG TGATGTCGTG TTAATTACCT ATGCCGATCA ATTTCACAGC AATGATTTAA AACCATTACC CACATTTAAT CAGTTTTACC ATCAATGGCT GCAAAGCATT TTTTCACATG TTCATTTGTT GCCGTTTTAT CCATGGTCAT CTGATGATGG CTTTTCGGTA ATTGATTATC ATCAGGTCGC CAGTGAAGCG GGGGAGTGGC AGGATATTCA GCAACTCGGT GAATGCAGTC ATTTAATGTT TGATTTTGTC TGCAACCATA TGTCGGCAAA AAGTGAATGG TTTAAAAACT ATTTACAACA GCATCCAGGT TTTGAAGATT TTTTTATTGC CGTTGACCCG CAAACCGATC TCAGCGCCGT CACTCGCCCG CGTGCGTTAC CGTTATTAAC GCCATTCCAG ATGCGCGATC ATTCAACGCG CCATTTATGG ACCACCTTTA GTGACGATCA AATTGACCTG AATTACCGTA GCCCTGAAGT GTTGCTGGCG ATGGTGGATG TTTTACTCTG TTACCTTGCG AAAGGTGCTG AGTATGTCCG CCTGGATGCC GTTGGCTTTA TGTGGAAAGA GCCGGGAACA AGCTGCATCC ATCTGGAAAA AACACATCTG ATTATCAAAC TATTACGGTC GATTATTGAT AACGTTGCGC CAGGTACAGT GATCATTACC GAGACCAATG TTCCGCATAA AGACAACATT GCTTACTTTG GCGCAGGCGA TGACGAAGCA CATATGGTGT ACCAGTTCTC GCTGCCGCCA CTGGTGCTGC ATGCGGTGCA AAAACAGAAC GTTGAGGCGC TTTGTGCGTG GGCGCAAAAC CTGACACTAC CTTCCAGCAA CACCACCTGG TTTAACTTCC TCGCCTCTCA CGATGGCATC GGGCTAAACC CGCTACGGGG CTTGTTGCCT GAAAGCGAAA TATTAGAGCT GGTCGAGGCG TTACAGCAGG AAGGTGCATT AGTAAACTGG AAAAATAATC CCGACGGTAC ACGCAGTCCG TATGAAATAA ATGTGACCTA TATGGATGCG TTAAGCCGCC GTGAGAGTAG CGATGAAGAA CGTTGCGCCA GGTTTATCCT TGCCCATGCG ATTTTGTTAA GTTTCCCCGG TGTGCCAGCG ATATATATTC AAAGTATTCT TGGCTCGCGT AATGATTACG CAGGTGTCGA AAAACTCGGA TATAACCGTG CGATTAACCG TAAAAAATAT CACAGTAAAG AGATAACCCG AGAACTGAAC GATGAAGCTA CATTAAGGCA TGCGGTATAT CATGAGTTGT CGCGTTTAAT TACACTTCGT CGCAGCCATA ACGAGTTTCA TCCGGATAAT AATTTTACCA TTGATACGAT TAATTCATCC GTAATGCGTA TTCAAAGAAG TAACGCTGAT GGTAATTGTC TGACTGGATT GTTTAATGTC AGTAAAAATA TTCAGCATGT AAATATTACT AATCTGCATG GTCGGGATCT GATTAGTGAA GTTGATATAT TGGGTAATGA AATAACGCTG CGCCCCTGGC AGGTTATGTG GATTAAATAA
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Protein sequence | MKQKITDYLD EIYGGTFTAT HLQKLVTRLE SAKRLITQRR KKHWDESDVV LITYADQFHS NDLKPLPTFN QFYHQWLQSI FSHVHLLPFY PWSSDDGFSV IDYHQVASEA GEWQDIQQLG ECSHLMFDFV CNHMSAKSEW FKNYLQQHPG FEDFFIAVDP QTDLSAVTRP RALPLLTPFQ MRDHSTRHLW TTFSDDQIDL NYRSPEVLLA MVDVLLCYLA KGAEYVRLDA VGFMWKEPGT SCIHLEKTHL IIKLLRSIID NVAPGTVIIT ETNVPHKDNI AYFGAGDDEA HMVYQFSLPP LVLHAVQKQN VEALCAWAQN LTLPSSNTTW FNFLASHDGI GLNPLRGLLP ESEILELVEA LQQEGALVNW KNNPDGTRSP YEINVTYMDA LSRRESSDEE RCARFILAHA ILLSFPGVPA IYIQSILGSR NDYAGVEKLG YNRAINRKKY HSKEITRELN DEATLRHAVY HELSRLITLR RSHNEFHPDN NFTIDTINSS VMRIQRSNAD GNCLTGLFNV SKNIQHVNIT NLHGRDLISE VDILGNEITL RPWQVMWIK
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