| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2259 |
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| Symbol | |
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| ID | 6067051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2489997 |
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| End bp | 2490419 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641601663 |
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| Product | phenylacetic acid degradation protein PaaD |
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| Protein accession | YP_001725222 |
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| Protein GI | 170020268 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.059519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCATA AGGCCTGGCA AAATGCCCAT GCAATGTATG AGAACGATGC CTGCGCCAAA
GCGCTTGGCA TCGACATTAT CTCAATGGAT GAAGGCTTTG CTGTAGTGAC CATGACCGTC
ACTGCACAAA TGCTTAACGG TCATCAAAGT TGCCACGGCG GGCAGCTATT TTCACTGGCT
GATACTGCCT TTGCCTACGC CTGCAATAGC CAGGGGCTGG CAGCCGTCGC TTCTGCCTGC
ACGATTGATT TTTTACGTCC AGGCTTTGCC GGAGACACCT TAACTGCTAC TGCGCAGGTA
CGTCATCAGG GCAAGCAAAC CGGTGTTTAC GACATCGAAA TTGTTAACCA ACAACAAAAA
ACGGTTGCGC TGTTTCGCGG TAAATCTCAC CGCATCGGCG GCACCATTAC AGGAGAAGCC
TGA
|
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| Protein sequence | MSHKAWQNAH AMYENDACAK ALGIDIISMD EGFAVVTMTV TAQMLNGHQS CHGGQLFSLA
DTAFAYACNS QGLAAVASAC TIDFLRPGFA GDTLTATAQV RHQGKQTGVY DIEIVNQQQK
TVALFRGKSH RIGGTITGEA
|
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