Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2237 |
Symbol | |
ID | 6067319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2456175 |
End bp | 2457194 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641601642 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001725201 |
Protein GI | 170020247 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.956085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCTT TAATTGTTAA TAATATTTTG CAATCAAGTT ATCATAATCA AACAACTTCA CTTGTCAGCG ACACCGCTTC GTTTTTAACA TCGCTTATGG AAAAAAATAG TCTGTTTAGT CAGCGCATCC GTTTGCGCCA CCTTCATACA TTCGTAGCTG TCGCACAACA AGGAACTTTG GGGCGCGCGG CTGAAACCCT TAATTTGAGT CAACCTGCGC TCTCTAAGAC ATTGAATGAA CTGGAGCAGC TGACGGGCGC TCGCTTGTTT GAGCGTGGTC GTCAGGGGGC GCAACTTACC TTACCCGGCG AACAATTTTT AACGCATGCA GTCAGAGTTC TTGACGCCAT CAACACTGCC GGACAGTCGC TTCATCGTAA AGAAGGTCTT AATAATGATG TCGTCAGGGT TGGTGCACTA CCTACTGCGG CACTGGGGAT ATTACCTTCG GTTATAGGTC AGTTTCATCA GCAACAAAAA GAAACGACCT TGCAAGTTGC GACAATGAGT AACCCTATGA TTCTGGCGGG TTTGAAAACC GGGGAAATCG ATATCGGCAT TGGTCGGATG TCAGATCCTG AACTGATGAC CGGGCTTAAT TACGAACTGC TGTTTCTTGA ATCGCTGAAG CTGGTTGTCC GCCCTAATCA CCCGCTACTT CAGGAGAACG TAACGCTAAG CCGGGTGCTG GAATGGCCGG TCGTTGTATC ACCAGAAGGC ACTGCGCCAC GCCAGCATTC AGATGCATTA GTACAGAGCC AGGGATGTAA AATTCCTTCG GGTTGTATCG AAACGCTGTC TGCTTCGCTA TCTCGTCAAC TTACGGTTGA ATACGACTAC GTGTGGTTTG TCCCTTCTGG CGCGGTAAAA GACGACCTGC GTCATGCCAC GCTGGTGGCC CTGCCTGTTC CGGGACATGG TGCAGGCGAA CCGATTGGAA TACTGACCCG CGTAGATGCG ACGTTCTCTT CTGGTTGCCA GTTGATGATT AACGCTATTC GAAAATCAAT GCCGTTCTGA
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Protein sequence | MIALIVNNIL QSSYHNQTTS LVSDTASFLT SLMEKNSLFS QRIRLRHLHT FVAVAQQGTL GRAAETLNLS QPALSKTLNE LEQLTGARLF ERGRQGAQLT LPGEQFLTHA VRVLDAINTA GQSLHRKEGL NNDVVRVGAL PTAALGILPS VIGQFHQQQK ETTLQVATMS NPMILAGLKT GEIDIGIGRM SDPELMTGLN YELLFLESLK LVVRPNHPLL QENVTLSRVL EWPVVVSPEG TAPRQHSDAL VQSQGCKIPS GCIETLSASL SRQLTVEYDY VWFVPSGAVK DDLRHATLVA LPVPGHGAGE PIGILTRVDA TFSSGCQLMI NAIRKSMPF
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