| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2168 |
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| Symbol | |
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| ID | 6067485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 2378141 |
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| End bp | 2380540 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641601575 |
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| Product | cAMP phosphodiesterase |
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| Protein accession | YP_001725134 |
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| Protein GI | 170020180 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.300565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTAA CCGATGCGGA AAATGCCGCC GATGGCATTT TTTTCCCCGC CCTTGAACAA
AATATGATGG GCGCGGTGTT AATTAACGAA AATGATGAAG TGATGTTTTT CAACCCCGCC
GCAGAGAAGC TCTGGGGGTA CAAACGTGAA GAAGTCATTG GCAATAACAT TGATATGCTG
ATTCCGCGGG ATTTGCGTCC TGCGCATCCT GAATACATTC GTCATAACCG TGAAGGTGGT
AAAGCGCGCG TCGAGGGGAT GAGTCGGGAG CTGCAGCTGG AGAAAAAAGA CGGCAGTAAA
ATCTGGACCC GTTTTGCGCT ATCGAAAGTG AGCGCCGAGG GGAAAGTTTA TTACCTGGCG
CTGGTACGGG ATGCCAGCGT AGAAATGGCG CAAAAAGAAC AGACCCGACA ATTGATTATT
GCCGTTGACC ATCTCGACCG ACCGGTGATT GTCCTCGATC CGGAACGCCA TATTGTGCAG
TGCAATCGCG CATTTACCGA AATGTTTGGT TACTGCATTA GCGAAGCCAG CGGTATGCAG
CCCGATACAC TCCTGAACAT TCCTGAATTC CCTGCCGATA ACCGCATTCG TTTACAACAG
TTGCTATGGA AAACCGCCCG CGATCAGGAC GAATTTCTGC TGTTGACGCG CACCGGTGAA
AAAATCTGGA TTAAAGCCTC TATCAGCCCG GTTTATGACG TGCTCGCGCA TCTGCAGAAC
CTGGTAATGA CTTTCTCGGA TATCACCGAA GAACGGCAAA TCCGCCAGCT TGAAGGCAAT
ATTCTCGCCG CCATGTGCAG CAGCCCGCCA TTTCATGAAA TGGGGGAAAT CATTTGTCGT
AACATCGAAT CTGTACTCAA CGAATCGCAT GTTTCGCTGT TCGCACTGCG CAACGGGATG
CCGATACACT GGGCGTCATC TTCCCACGGT GCAGAAATTC AAAATGCGCA AAGCTGGTCA
GCGACCATTC GTCAGCGTGA TGGCGCGCCT GCGGGGATCC TGCAAATTAA AACCTCGTCA
GGAGCAGAAA CCAGCGCCTT TATCGAACGC GTGGCAGATA TCAGCCAGCA TATGGCCGCG
CTGGCGCTGG AACAGGAAAA AAGCCGTCAG CATATTGAAC AACTCATCCA ATTTGATCCG
ATGACCGGTC TGCCAAATCG CAATAACCTG CACAATTACC TCGATGACCT GGTCGACAAA
GCCGTCTCTC CCGTGGTGTA TCTCATCGGT GTTGACCATA TTCAGGATGT GATTGATAGC
CTTGGCTATG CGTGGGCCGA TCAGGCATTG CTGGAAGTGG TCAATCGCTT TCGTGAAAAA
CTCAAACCGG ATCAGTATCT CTGTCGTATC GAAGGTACGC AGTTTGTCCT CGTGAGCCTC
GAAAACGACG TCAGTAACAT TACCCAAATC GCCGATGAGC TACGGAATGT GGTCAGCAAG
CCGATAATGA TTGACGATAA ACCCTTCCCG CTTACCTTGA GTATTGGCAT CAGCTACGAC
GTGGGTAAAA ACCGCGATTA CTTGCTCTCC ACTGCTCACA ATGCAATGGA TTATATTCGC
AAGAATGGCG GTAACGGCTG GCAGTTCTTC AGCCCGGCGA TGAACGAAAT GGTAAAAGAG
CGTTTGTTTT TAGGCGCAGC GCTGAAAGAA GCGATTAGCA ATAACCAACT GAAACTGGTT
TACCAGCCGC AAATCTTCGC AGAAACGGGT GAACTGTACG GCATCGAAGC CCTTGCTCGC
TGGCACGATC CCCTGCATGG TCATGTGCCC CCTTCACGGT TTATTCCTCT CGCAGAAGAG
ATTGGTGAAA TCGAAAATAT TGGGCGCTGG GTCATCGCGG AAGCTTGCCG TCAGTTAGCA
GAATGGCGTA GCCAGAATAT TCATATCCCG GCGCTTTCCG TTAACTTGTC GGCACTGCAC
TTTCGCAGTA ATCAGCTGCC TAATCAGGTG TCTGATGCAA TGCAAGCCTG GGGTATTGAC
GGCCACCAGC TGACGGTGGA AATCACGGAA AGCATGATGA TGGAACACGA TACCGAAATC
TTTAAGCGCA TTCAGATCCT GCGCGATATG GGCGTGGGCT TATCGGTAGA TGATTTTGGC
ACGGGCTTTT CCGGATTATC CCGCTTAGTC AGTCTTCCGG TAACGGAAAT CAAAATTGAC
AAAAGTTTTG TCGATCGTTG TCTGACGGAA AAACGCATCC TTGCCTTACT TGAAGCCATT
ACCAGCATTG GGCAAAGCCT CAATTTAACC GTCGTGGCGG AAGGCGTCGA AACCAAAGAG
CAATTTGAGA TGCTACGCAA GATCCACTGT CGCGTTATTC AGGGATATTT CTTTTCCCGC
CCCCTACCCG CCGAAGAAAT TCCAGGCTGG ATGAGCAGCG TGTTACCGCT GAAAATCTGA
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| Protein sequence | MKLTDAENAA DGIFFPALEQ NMMGAVLINE NDEVMFFNPA AEKLWGYKRE EVIGNNIDML
IPRDLRPAHP EYIRHNREGG KARVEGMSRE LQLEKKDGSK IWTRFALSKV SAEGKVYYLA
LVRDASVEMA QKEQTRQLII AVDHLDRPVI VLDPERHIVQ CNRAFTEMFG YCISEASGMQ
PDTLLNIPEF PADNRIRLQQ LLWKTARDQD EFLLLTRTGE KIWIKASISP VYDVLAHLQN
LVMTFSDITE ERQIRQLEGN ILAAMCSSPP FHEMGEIICR NIESVLNESH VSLFALRNGM
PIHWASSSHG AEIQNAQSWS ATIRQRDGAP AGILQIKTSS GAETSAFIER VADISQHMAA
LALEQEKSRQ HIEQLIQFDP MTGLPNRNNL HNYLDDLVDK AVSPVVYLIG VDHIQDVIDS
LGYAWADQAL LEVVNRFREK LKPDQYLCRI EGTQFVLVSL ENDVSNITQI ADELRNVVSK
PIMIDDKPFP LTLSIGISYD VGKNRDYLLS TAHNAMDYIR KNGGNGWQFF SPAMNEMVKE
RLFLGAALKE AISNNQLKLV YQPQIFAETG ELYGIEALAR WHDPLHGHVP PSRFIPLAEE
IGEIENIGRW VIAEACRQLA EWRSQNIHIP ALSVNLSALH FRSNQLPNQV SDAMQAWGID
GHQLTVEITE SMMMEHDTEI FKRIQILRDM GVGLSVDDFG TGFSGLSRLV SLPVTEIKID
KSFVDRCLTE KRILALLEAI TSIGQSLNLT VVAEGVETKE QFEMLRKIHC RVIQGYFFSR
PLPAEEIPGW MSSVLPLKI
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