| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2110 |
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| Symbol | |
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| ID | 6067172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 2305295 |
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| End bp | 2305894 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641601518 |
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| Product | virulence-related outer membrane protein |
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| Protein accession | YP_001725077 |
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| Protein GI | 170020123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00018608 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTAAAG TTTGTGCAGC CATTTTGTCC GCAGCCATCT GTCTGGCCGT ATCCGGTGCG
CCTGCATGGG CGTCTGAGCA GCAGGCCACA CTGAGCGCAG GGTATCTTCA TGCCCGTACG
AACGCTCCCG GCAGCGATGA TCTGAACGGG ATTAACGTGA AATACCGTTA TGAGTTTACG
GACACGCTGG GGCTGATTAC GTCATTCAGT TATGCCAACG CTGAAGATGA GCAAAAAACG
CATTACAGCG ATACCCGCTG GCATGAAGAT TCCGTGCGTA ACCGCTGGTT CAGCGTGATG
GCGGGGCCGT CTGTGCGCGT GAATGAATGG TTCAGCGCGT ATGCGATGGC GGGTATGGCT
TACAGCCGTG TTTCGACTTT CTCCGGAGAT TATATCCGCG TAACTGACAA CAAGGGGAAA
ACGCACGATG TGCTGACCGG AAGTGATGAC GGTCGCCACA GCAACACGTC TCTGGCGTGG
GGAGCTGGCG TGCAGTTTAA CCCGACCGAA TCCGTGGCCG TTGACGTCGC TTATGAAGGC
TCCGGCAGCG GTGACTGGCG TACCAACAGT TTCATCGTGG GTGTCGGTTA TAAATTCTGA
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| Protein sequence | MRKVCAAILS AAICLAVSGA PAWASEQQAT LSAGYLHART NAPGSDDLNG INVKYRYEFT
DTLGLITSFS YANAEDEQKT HYSDTRWHED SVRNRWFSVM AGPSVRVNEW FSAYAMAGMA
YSRVSTFSGD YIRVTDNKGK THDVLTGSDD GRHSNTSLAW GAGVQFNPTE SVAVDVAYEG
SGSGDWRTNS FIVGVGYKF
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