Gene EcolC_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2025 
Symbol 
ID6067938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2235553 
End bp2236935 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content54% 
IMG OID641601437 
Productarginine/ornithine antiporter 
Protein accessionYP_001724996 
Protein GI170020042 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AACTGGGACT GAGCGCACTC ACCGCGCTGG TATTAAGCTC AATGCTGGGC 
GCGGGTGTTT TCAGTCTGCC GCAAAATATG GCGGCAGTTG CCAGCCCGGC AGCACTGCTC
ATCGGCTGGG GTATTACTGG CGCTGGCATT TTATTGCTGG CCTTTGCCAT GCTGATCCTC
ACGCGCATTC GTCCCGAACT TGACGGCGGT ATCTTTACCT ATGCCCGCGA AGGGTTTGGC
GAGCTAATCG GCTTTTGTTC CGCATGGGGA TACTGGCTGT GCGCAGTCAT CGCCAACGTC
TCCTATCTGG TGATCGTTTT TTCCGCGTTA AGCTTTTTTA CGGACACGCC GGAATTGCGC
CTGTTTGGCG ATGGTAATAC CTGGCAATCG ATAGTCGGTG CATCGGCTTT ATTGTGGATT
GTTCACTTTT TGATCCTGCG CGGGGTGCAA ACCGCTGCCA GCATTAACCT GGTGGCGACA
CTGGCAAAAT TGTTGCCGCT GGGTCTGTTT GTTGTGCTGG CGATGATGAT GTTCAAACTG
GATACCTTCA AGCTCGACTT CACCGGACTT GCACTTGGCG TACCCGTTTG GGAACAGGTG
AAAAACACCA TGCTGATCAC CCTGTGGGTT TTCATTGGTG TGGAAGGTGC CGTGGTTGTT
TCTGCGCGTG CGCGTAATAA ACGTGATGTT GGCAAAGCGA CACTGCTGGC GGTTCTCTCC
GCTCTGGGCG TTTACTTGCT GGTAACGCTG CTTTCGCTGG GTGTGGTGGC ACGTCCTGAA
CTGGCTGAAA TTCGTAACCC GTCAATGGCC GGTCTGATGG TGGAAATGAT GGGACCATGG
GGCGAAATCA TCATCGCTGC CGGTTTGATC GTTTCCGTTT GCGGCGCGTA CTTAAGCTGG
ACCATCATGG CAGCAGAAGT ACCGTTCCTG GCCGCCACTC ATAAAGCATT CCCGCGCATT
TTTGCGCGCC AGAACGCACA AGCTGCGCCA TCCGCCTCAC TGTGGTTGAC CAACATCTGC
GTGCAAATTT GTCTGGTACT CATCTGGCTG ACCGGTTCCG ATTACAACAC GTTGCTGACC
ATCGCCTCAG AAATGATTCT GGTGCCCTAT TTCCTGGTCG GCGCGTTCTT GCTGAAAATC
GCAACCCGTC CACTGCATAA AGCGGTAGGT GTCGGTGCCT GCATTTATGG CTTATGGTTA
TTGTACGCCT CTGGTCCAAT GCACTTGCTG TTATCCGTTG TTCTGTATGC ACCGGGGCTG
CTGGTTTTCC TGTACGCGCG CAAAACGCAT ACCCATGATA ATGTACTGAA CCGTCAGGAA
ATGGTGCTGA TTGGCATGCT GTTAATTGCC TCAGTTCCGG CGACCTGGAT GCTGGTGGGA
TAA
 
Protein sequence
MEKKLGLSAL TALVLSSMLG AGVFSLPQNM AAVASPAALL IGWGITGAGI LLLAFAMLIL 
TRIRPELDGG IFTYAREGFG ELIGFCSAWG YWLCAVIANV SYLVIVFSAL SFFTDTPELR
LFGDGNTWQS IVGASALLWI VHFLILRGVQ TAASINLVAT LAKLLPLGLF VVLAMMMFKL
DTFKLDFTGL ALGVPVWEQV KNTMLITLWV FIGVEGAVVV SARARNKRDV GKATLLAVLS
ALGVYLLVTL LSLGVVARPE LAEIRNPSMA GLMVEMMGPW GEIIIAAGLI VSVCGAYLSW
TIMAAEVPFL AATHKAFPRI FARQNAQAAP SASLWLTNIC VQICLVLIWL TGSDYNTLLT
IASEMILVPY FLVGAFLLKI ATRPLHKAVG VGACIYGLWL LYASGPMHLL LSVVLYAPGL
LVFLYARKTH THDNVLNRQE MVLIGMLLIA SVPATWMLVG