Gene EcolC_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1993 
Symbol 
ID6068151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2200789 
End bp2201649 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content53% 
IMG OID641601407 
Productpyridoxamine kinase 
Protein accessionYP_001724966 
Protein GI170020012 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0266148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTCTCGCTAT CCAGTCTCAC GTTGTTTATG GTCATGCGGG TAACAGTGCG 
GCAGAGTTTC CGATGCGCCG CCTGGGCGCG AACGTCTGGC CGCTGAACAC CGTTCAATTT
TCTAATCACA CCCAATACGG CAAATGGACT GGCTGCGTGA TGCCGCCCAG CCATTTAACC
GAAATTGTGC AAGGCATTGC CGCCATTGAT AAATTACACA CCTGTGATGC CGTATTAAGT
GGCTATCTGG GATCGGCGGA GCAGGGTGAA CATATCCTCG GTATCGTCCG TCAGGTGAAA
GCCGCGAATC CGCAGGCGAA ATATTTTTGC GATCCGGTAA TGGGTCATCC GGAAAAAGGC
TGTATCGTTG CACCGGGTGT CGCAGAGTTT CATGTGCGGC ACGGTTTGCC TGCCAGCGAT
ATCATTGCGC CAAATCTGGT TGAGCTGGAA ATACTCTGTG AGCATGCGGT AAATAACGTC
GAAGAAGCGG TTCTGGCAGC GCGCGAACTC ATTGCGCAAG GGCCACAAAT TGTGTTGGTT
AAACACCTGG CGCGAGCTGG CTACAGCCGT GACCGTTTTG AAATGCTGCT GGTCACCGCC
GATGAAGCCT GGCATATCAG CCGTCCGCTG GTGGATTTTG GTATGCGCCA GCCGGTAGGT
GTTGGTGATG TGACGAGCGG TTTACTGCTG GTGAAACTGC TTCAGGGGGC AACGCTGCAG
GAGGCGCTGG AACATGTGAC CGCTGCAGTC TACGAAATCA TGGTGACCAC CAAAGCAATG
CAGGAATATG AGCTGCAAGT GGTGGCTGCT CAGGATCGTA TTGCCAAACC AGAACATTAC
TTCAGCGCAA CAAAGCTCTG A
 
Protein sequence
MKNILAIQSH VVYGHAGNSA AEFPMRRLGA NVWPLNTVQF SNHTQYGKWT GCVMPPSHLT 
EIVQGIAAID KLHTCDAVLS GYLGSAEQGE HILGIVRQVK AANPQAKYFC DPVMGHPEKG
CIVAPGVAEF HVRHGLPASD IIAPNLVELE ILCEHAVNNV EEAVLAAREL IAQGPQIVLV
KHLARAGYSR DRFEMLLVTA DEAWHISRPL VDFGMRQPVG VGDVTSGLLL VKLLQGATLQ
EALEHVTAAV YEIMVTTKAM QEYELQVVAA QDRIAKPEHY FSATKL