Gene EcolC_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1953 
Symbol 
ID6068429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2157966 
End bp2158970 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID641601365 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001724926 
Protein GI170019972 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000819451 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000126491 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAACGCG CGTCTTTGCT TACACTCACG CTTATCGGCG CTTTTAGCGC CATCCAGGCT 
GCCTGGGCGG TTGATTATCC GCTACCACCA ACCGGAAGCC GACTGGTTGG GCAAAATCAA
ACGTATACGG TGCAAGAAGG GGATAAAAAC CTTCAGGCTA TTGCCCGACG TTTTGATACT
GCGGCAATGT TGATCCTTGA AGCCAATAAC ACTATCGCCC CGGTGCCAAA ACCTGGTACG
ACGATAACTA TTCCTTCACA ACTGTTATTA CCTGATGCAC CGCGTCAGGG GATTATCGTT
AACCTTGCAG AGCTGCGCCT TTATTATTAT CCGCCGGGAG AAAATATTGT GCAGGTTTAT
CCAATAGGTA TTGGATTGCA GGGGCTGGAA ACGCCGGTGA TGGAAACGCG TGTTGGGCAG
AAAATCCCTA ACCCAACCTG GACGCCTACG GCAGGCATTC GTCAGCGTTC GCTGGAGCGT
GGCATTAAAT TACCGCCAGT CGTTCCTGCC GGACCAAATA ACCCGCTAGG ACGTTACGCA
CTGCGCCTCG CGCATGGTAA TGGCGAATAC CTCATTCATG GTACCAGTGC GCCGGACAGC
GTCGGTTTGC GCGTCAGTTC AGGGTGTATT CGCATGAATG CACCGGATAT TAAAGCCTTG
TTCTCCAGCG TGCGGACGGG AACGCCGGTG AAAGTGATCA ACGAACCGGT GAAATATTCC
GTGGAGCCTA ACGGGATGCG TTATGTTGAA GTACATCGAC CACTATCGGC AGAAGAACAG
CAGAACGTTC AGACAATGCC ATACACACTG CCAGCAGGCT TTACGCAATT TAAAGACAAT
AAGGCTGTAG ATCAGAAGTT AGTCGATAAA GCGTTGTATC GTCGGGCAGG GTATCCGGTT
TCGGTGAGCA GTGGAGCAAC TCCCGCAGCC AGCAATGCGC CTTCAGTAGA GTCAGCGCAG
AATGGTGAAC CAGAGCAAGG GAATATGTTA CGCGTGACGC AGTAG
 
Protein sequence
MKRASLLTLT LIGAFSAIQA AWAVDYPLPP TGSRLVGQNQ TYTVQEGDKN LQAIARRFDT 
AAMLILEANN TIAPVPKPGT TITIPSQLLL PDAPRQGIIV NLAELRLYYY PPGENIVQVY
PIGIGLQGLE TPVMETRVGQ KIPNPTWTPT AGIRQRSLER GIKLPPVVPA GPNNPLGRYA
LRLAHGNGEY LIHGTSAPDS VGLRVSSGCI RMNAPDIKAL FSSVRTGTPV KVINEPVKYS
VEPNGMRYVE VHRPLSAEEQ QNVQTMPYTL PAGFTQFKDN KAVDQKLVDK ALYRRAGYPV
SVSSGATPAA SNAPSVESAQ NGEPEQGNML RVTQ