Gene EcolC_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1945 
Symbol 
ID6068521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2151059 
End bp2151469 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content52% 
IMG OID641601357 
Producthypothetical protein 
Protein accessionYP_001724918 
Protein GI170019964 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000536011 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATATGGA AACGGAAAAT CACCCTGGAA GCACTGAATG CTATGGGTGA AGGAAACATG 
GTGGGGTTCC TGGATATTCG CTTTGAACAT ATTGGTGATG ACACCCTTGA AGCGACAATG
CCAGTAGACT CGCGGACAAA GCAGCCTTTC GGGTTGCTGC ATGGAGGAGC ATCCGTGGTA
CTGGCCGAAA GTATCGGTTC CGTTGCCGGT TATTTATGTA CCGAAGGTGA GCAAAAAGTG
GGTGGTCTGG AAATTAATGC TAACCACGTC CGCTCGGCAC GAGAAGGGCG GGTGCGCGGC
GTATGCAAAC CGTTGCATCT CGGTTCGCGT CACCAGGTCT GGCAGATTGA AATCTTCGAT
GAGAAAGGGC GTTTGTGCTG TTCGTCACGA TTGACGACCG CCATTTTGTG A
 
Protein sequence
MIWKRKITLE ALNAMGEGNM VGFLDIRFEH IGDDTLEATM PVDSRTKQPF GLLHGGASVV 
LAESIGSVAG YLCTEGEQKV GGLEINANHV RSAREGRVRG VCKPLHLGSR HQVWQIEIFD
EKGRLCCSSR LTTAIL