Gene EcolC_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1892 
SymbolnadE 
ID6064933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2093405 
End bp2094232 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content50% 
IMG OID641601305 
ProductNAD synthetase 
Protein accessionYP_001724867 
Protein GI170019913 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.154506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGC AACAACAAAT AATAAAGGCG CTGGGCGCAA AACCGCAGAT TAATGCTGAA 
GAGGAAATTC GTCGTAGTGT CGATTTTCTG AAAAGCTACC TGCAAACTTA TCCGTTCATT
AAATCACTGG TGCTCGGGAT CAGCGGCGGT CAGGACTCCA CGCTTGCCGG AAAGCTGTGC
CAGATGGCGA TTAATGAGCT GCGCCTGGAA ACCGGCAACG AATCACTGCA ATTTATTGCC
GTACGCCTGC CCTATGGTGT TCAGGCCGAC GAACAAGATT GCCAGGATGC CATTGCCTTT
ATTCAACCGG ATCGCGTATT AACCGTTAAT ATCAAGGGCG CGGTATTGGC CAGCGAACAG
GCATTGCGGG AAGCAGGCAT TGAACTGAGC GATTTTGTCC GTGGCAATGA AAAAGCGCGT
GAGCGGATGA AAGCACAATA TAGCATTGCG GGTATGACCA GCGGTGTCGT GGTGGGCACC
GATCATGCAG CAGAAGCCAT TACCGGATTC TTCACTAAAT ATGGTGACGG CGGTACGGAC
ATTAATCCGC TGTATCGTCT CAACAAACGT CAGGGTAAAC AGTTACTGGC GGCATTAGCT
TGCCCGGAAC ACCTTTATAA GAAAGCGCCA ACGGCCGATC TGGAAGATGA TCGCCCTTCT
CTGCCAGATG AAGTGGCACT CGGCGTGACC TATGACAATA TCGACGACTA TCTGGAAGGG
AAAAACGTAC CTCAACAGGT CGCCAGAACA ATAGAGAACT GGTATCTGAA AACCGAACAT
AAACGCCGTC CGCCAATTAC CGTTTTCGAT GATTTCTGGA AAAAGTAA
 
Protein sequence
MTLQQQIIKA LGAKPQINAE EEIRRSVDFL KSYLQTYPFI KSLVLGISGG QDSTLAGKLC 
QMAINELRLE TGNESLQFIA VRLPYGVQAD EQDCQDAIAF IQPDRVLTVN IKGAVLASEQ
ALREAGIELS DFVRGNEKAR ERMKAQYSIA GMTSGVVVGT DHAAEAITGF FTKYGDGGTD
INPLYRLNKR QGKQLLAALA CPEHLYKKAP TADLEDDRPS LPDEVALGVT YDNIDDYLEG
KNVPQQVART IENWYLKTEH KRRPPITVFD DFWKK