Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1880 |
Symbol | |
ID | 6066927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2081175 |
End bp | 2081882 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641601293 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001724855 |
Protein GI | 170019901 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00124953 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGAAGA TACAATCGCG TAAAATCTGG TACTACCGTA TAACCCTCAT CATCCTGTTG TTCGCTATGC TGCTCGCATG GGCGCTGCTT CCCGGCGTCC ATGAGTTTAT CAATCGCAGC GTTGCGGCGT TTGCCGCCGT GGACCAACAG GGTATAGAAC GCTTTATTCA GTCTTACGGC GCACTGGCGG CAGTTGTCTC GTTCTTGTTG ATGATTTTAC AGGCCATTGC TGCACCGCTA CCTGCGTTTT TGATCACCTT TGCCAATGCG TCGCTGTTTG GCGCGTTCTG GGGCGGCTTG CTGTCGTGGA CCAGTTCGAT GGCCGGCGCG GCGCTGTGCT TTTTTATCGC CAGAGTGATG GGCCGCGAAG TGGTGGAAAA ATTAACCGGC AAAACCGTGC TTGACAGTAT GGACGGCTTT TTCACTCGCT ACGGCAAACA CACCATTCTG GTCTGTCGGT TATTGCCTTT TGTCCCTTTC GATCCAATCA GCTATGCTGC CGGTTTGACT TCAATACGTT TTCGCTCGTT TTTTATCGCC ACCGGGCTTG GTCAGTTACC GGCAACTATT GTTTATTCCT GGGCGGGCAG CATGTTAACA GGCGGTACTT TCTGGTTTGT CACCGGACTG TTTATTCTGT TTGCCCTGAC CGTGGTGATT TTTATGGCGA AGAAAATATG GCTTGAACGC CAGAAGAGGA ATGCCTGA
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Protein sequence | MMKIQSRKIW YYRITLIILL FAMLLAWALL PGVHEFINRS VAAFAAVDQQ GIERFIQSYG ALAAVVSFLL MILQAIAAPL PAFLITFANA SLFGAFWGGL LSWTSSMAGA ALCFFIARVM GREVVEKLTG KTVLDSMDGF FTRYGKHTIL VCRLLPFVPF DPISYAAGLT SIRFRSFFIA TGLGQLPATI VYSWAGSMLT GGTFWFVTGL FILFALTVVI FMAKKIWLER QKRNA
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