Gene EcolC_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1843 
Symbol 
ID6064711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2041112 
End bp2041933 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content50% 
IMG OID641601257 
ProductAraC family transcriptional regulator 
Protein accessionYP_001724819 
Protein GI170019865 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.34721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.227218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACA GGTTGAATCT CAATGGCTAT GAACCCGACC GACACCATGA AGCCGCGGTC 
GCATTTTGTA TTCACGCCGG AACGGATGAG TTAACCAGTC CTGTACATCA GCACCGCAAA
GGACAGCTGA TACTGGCATT ACATGGTGCA ATTACCTGTA CGGTGGAAAA TGCTTTGTGG
ATGGTGCCGC CACAATATGC GGTTTGGATA CCGGGCGGGG TGGAACATAG CAATCAAGTG
ACAGCTAACG CTGAACTCTG TTTTCTGTTT ATCGAACCCA GCGCAGTGAC AATGCCGACA
ACCTGTTGCA CATTGAAAAT ATCGCCCTTA TGCCGGGAAT TAATTTTAAC TCTGGCAAAC
AGGACGACGA CTCAGCGTGC TGAGCCGATG ACCCGCAGAT TAATTCATGT CCTGTTTGAT
GAACTCCCTC AGCAGCCACA ACAACAGCTG CACCTACCCG TTTCTTCTCA TCCTAAAATC
CGCGCGATGG TGGAGATGAT GGCGAAAGAG CCCGTCGAGT GGGGGTCATT GGGGCAATGG
GCTGGCTTTT TTGCGATGAG TGAACGCAAT CTTGCCCGAC TGATAGTAAA AGAGACGGGG
TTGAGTTTTC GCCAGTGGCG ACAGCAGTTA CAGCTGATTA TGGCGCTTCA GGGATTAGTG
AAAGGCGATA CTGTACAGAA AGTTGCTCAT ACGCTGGGGT ATGATTCAAC AACGGCCTTT
ATTACTATGT TTAAGAAAGG CCTGGGGCAA ACGCCAGGCC GATATATTGC GGGATTAACT
ACTGTTTCCC CACAATCAGC GAAACCAGAC CCGCGGCAAT AA
 
Protein sequence
MMHRLNLNGY EPDRHHEAAV AFCIHAGTDE LTSPVHQHRK GQLILALHGA ITCTVENALW 
MVPPQYAVWI PGGVEHSNQV TANAELCFLF IEPSAVTMPT TCCTLKISPL CRELILTLAN
RTTTQRAEPM TRRLIHVLFD ELPQQPQQQL HLPVSSHPKI RAMVEMMAKE PVEWGSLGQW
AGFFAMSERN LARLIVKETG LSFRQWRQQL QLIMALQGLV KGDTVQKVAH TLGYDSTTAF
ITMFKKGLGQ TPGRYIAGLT TVSPQSAKPD PRQ