Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1800 |
Symbol | |
ID | 6066671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1999786 |
End bp | 2000283 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641601215 |
Product | putative GAF sensor protein |
Protein accession | YP_001724777 |
Protein GI | 170019823 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.657978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0831768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA CAGAATTTTA CGCGGATTTA AATCGCGACT TTAACGCGCT GATGGCGGGA GAAACCAGTT TTCTGGCAAC GCTTGCGAAC ACCAGTGCGT TGTTATACGA GCGTCTCACT GACGTAAACT GGGCAGGTTT TTATTTGCTT GAGGACGATA CACTGGTACT CGGACCATTT CAGGGCAAAA TTGCCTGTGT CCGGATACCC GTCGGGCGCG GGGTGTGCGG CACTGCGGTT GCCCGCAATC AAGTGCAGCG TATCGAGGAT GTTCACGCGT TTGACGGGCA TATTGCCTGT GATGCGGCGA GTAATTCTGA AATTGTTCTG CCGCTGGTGG TGAAAAATCA GATTATTGGT GTTCTTGACA TCGATAGTAC CGTCTTCGGT CGCTTTACAG ACGAGGACGA GCAAGGCTTA CGTCAGCTTG TGGCACAGCT TGAAAAAGTG CTTGCAACGA CGGATTACAA AAAATTCTTT GCGAGCGTCG CAGGATAA
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Protein sequence | MNKTEFYADL NRDFNALMAG ETSFLATLAN TSALLYERLT DVNWAGFYLL EDDTLVLGPF QGKIACVRIP VGRGVCGTAV ARNQVQRIED VHAFDGHIAC DAASNSEIVL PLVVKNQIIG VLDIDSTVFG RFTDEDEQGL RQLVAQLEKV LATTDYKKFF ASVAG
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