Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1672 |
Symbol | |
ID | 6066765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1875144 |
End bp | 1875815 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641601086 |
Product | hypothetical protein |
Protein accession | YP_001724651 |
Protein GI | 170019697 |
COG category | [R] General function prediction only |
COG ID | [COG3443] Predicted periplasmic or secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00489307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.127263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGG AGGAAACTGT TTTGGCGATT CGTCTTCACA AACTGGCTGT TGCTTTAGGT GTCTTTATTG TTAGCGCTCC TGCCTTTTCG CATGGTCATC ACTCACACGG CAAACCCTTA ACAGAGGTCG AACAAAAAGC TGCTAATGGT GTTTTTGATG ATGCCAATGT ACAAAACCGA ACGCTCAGTG ACTGGGATGG AGTCTGGCAA TCCGTTTATC CTTTACTGCA AAGTGGCAAA CTTGACCCCG TCTTTCAGAA GAAAGCGGAT GCAGATAAAA CTAAAACATT TGCTGAAATT AAAGATTATT ATCACAAAGG TTATGCAACA GATATCGAGA TGATTGGCAT TGAGGACGGC ATTGTTGAAT TCCATAGAAA TAATGAAACA ACATCCTGTA AATATGATTA CGATGGATAC AAAATACTCA CCTATAAATC AGGCAAGAAA GGCGTTCGTT ACTTATTCGA ATGTAAAGAT CCTGAAAGCA AAGCCCCTAA ATATATACAA TTTAGCGATC ATATAATTGC ACCACGAAAA TCATCTCATT TTCACATTTT TATGGGTAAT GATTCACAGC AATCTTTATT AAATGAAATG GAAAACTGGC CAACGTATTA TCCATATCAG TTGAGTAGCG AAGAAGTGGT CGAGGAAATG ATGTCTCATT GA
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Protein sequence | MTLEETVLAI RLHKLAVALG VFIVSAPAFS HGHHSHGKPL TEVEQKAANG VFDDANVQNR TLSDWDGVWQ SVYPLLQSGK LDPVFQKKAD ADKTKTFAEI KDYYHKGYAT DIEMIGIEDG IVEFHRNNET TSCKYDYDGY KILTYKSGKK GVRYLFECKD PESKAPKYIQ FSDHIIAPRK SSHFHIFMGN DSQQSLLNEM ENWPTYYPYQ LSSEEVVEEM MSH
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