| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1642 |
|---|
| Symbol | |
|---|
| ID | 6064683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1821691 |
|---|
| End bp | 1823061 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641601056 |
|---|
| Product | PTS system galactitol-specific IIC component |
|---|
| Protein accession | YP_001724626 |
|---|
| Protein GI | 170019672 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000536368 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGA TCACGCAATT TATAAACGAT CTGGGAAATT TTATATTTAT CCCGGTCATC
TTTCTGGTAC TGATGAAGAT ACTTGGCCGT CCTCTTTCAG AATGTATCTC ATCTGCCATC
AAAGTCGGCA TTGGTTTCAT TGCGTTAACC ATGACCATCA AACTGATGCT GGAAAAAATG
CAACCGGCAG TCACCGGATT AGCAGAAGCA ACAGGTTCCT CGCTCAGTGC CATCGATGTT
GGTGGCGCAG CGACTGCGGT TATGGGATTT GGCTCCAGCA TGGGCGCTAT CATTATTCCC
CTCTGTGTTG CGGTAAATAT TGCAATGCTG GTCGCCCGCC TGACTGACTG TGTTAACGTT
GATGTTTTCA ACCTTCATCA AAATGCGTCA ATGGGGGCAA TTGTTGGCGT CTATTCTGGT
AGCTTCCTGT ATGGCGCATT GACCGCCGCG CTATTCCATG TATGGGCGCT GATCGCTGCC
GATCTTGGTG CTAAAAATAA CGAAAAATTC TTTAACCTGC CAAAAGGTGT TGCGATCTCT
CACCCGGTTG CCAATACCTA CTTACTTTTC GCTTATCCAT TCAACTGGAT TTATGATCGC
ATCCCAGGCT TCCGTAATCT GAATGTGACC GCCGAAACTA TTCAAAAACG GTTTGGCATT
CTCGGCGATC CAACTATGGT TGGTTTTATT ATTGGTATTT TGTTGGGCTT TTGTGGTTAT
GGCTGGAAAT CCCCATACCA CACCATAATC GCCAGCCTAC AGTTAGGGAT GTATCTTGCT
GCAGTCATGC TTCTGTTGCC ACGTATGACC TCTATCATGA TGGAAGGGCT TGTTCCGCTT
TCCAACGTAG CACGCAAAAA ACTGGTCAAA CGTTTCCCGG ATCGTCAAAT CACTGTTGGT
ATGGACACTG CTCTGATTGT GGGCCATCCA TCAGTTATCG CCCCTGCATT ATTGCTGATC
CCGGTGATTG TGATCCTCGC CGTGATCTTG CCCGGCAACC GCGTTATGCC ACTGGGTGAT
CTCTCTCAGT TTGTGTTTTT CATTGCCTGC ATGGTACCTG TTTTCAATGG CAACATTATT
CGCACCTGGG TGACCTCGAT CATTTTGTTT GGTGGTGGTT TGTATATTGC ATCATGGATG
GCACCGGCTA CCAACGAAGT CTTCCAGAAG TTTGGTACAA ACCCGGATGC CAGCGTGATG
TACTCTTCGC TTAACCCGTC AGCGAATCCA TTTACTGGTC TGTTTGCCGC CCTGAGCCAT
GTTGGAATCA TTGGCTATGT GATGGCAGGT ATCCTTTTGT TATCTATTGG ATACTTAATT
AAACAAAAAT CACGTCGCCA GATTGAAACG GATTTGGAAA AAGCGCTTTA A
|
|---|
| Protein sequence | MELITQFIND LGNFIFIPVI FLVLMKILGR PLSECISSAI KVGIGFIALT MTIKLMLEKM
QPAVTGLAEA TGSSLSAIDV GGAATAVMGF GSSMGAIIIP LCVAVNIAML VARLTDCVNV
DVFNLHQNAS MGAIVGVYSG SFLYGALTAA LFHVWALIAA DLGAKNNEKF FNLPKGVAIS
HPVANTYLLF AYPFNWIYDR IPGFRNLNVT AETIQKRFGI LGDPTMVGFI IGILLGFCGY
GWKSPYHTII ASLQLGMYLA AVMLLLPRMT SIMMEGLVPL SNVARKKLVK RFPDRQITVG
MDTALIVGHP SVIAPALLLI PVIVILAVIL PGNRVMPLGD LSQFVFFIAC MVPVFNGNII
RTWVTSIILF GGGLYIASWM APATNEVFQK FGTNPDASVM YSSLNPSANP FTGLFAALSH
VGIIGYVMAG ILLLSIGYLI KQKSRRQIET DLEKAL
|
|---|
| |