Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1579 |
Symbol | |
ID | 6067139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1755973 |
End bp | 1757112 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641600995 |
Product | polysaccharide export protein |
Protein accession | YP_001724565 |
Protein GI | 170019611 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.479279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAT CCAAAATGAA ATTGATGCCA TTATTGGTGT CAGTAACCTT GATAAGCGGT TGCACAGTAC TTCCGGGCAG CAATATGTCG ACGATGGGCA AAGACGTCAT CAAACAGCAG GACGCTGATT TCGATCTCGA CAAAATGGTG AATGTTTATC CGCTGACCCC GCGCCTGATT GACCAATTAC GCCCACGCCC GAATGTAGCG CGCCCCAATA TGACGCTGGA AAGCGAGATC GCGAATTACC AGTATCGCGT CGGGCCGGGG GACGTTCTTA ATGTCACCGT CTGGGATCAC CCGGAACTCA CCACGCCAGC CGGTCAGTAC CGCAGCTCCA GCGACACCGG CAACTGGGTA CAGCCTGACG GCACTATGTT TTACCCGTAT ATCGGCAAGG TTCACGTAGT GGGGAAAACG CTCGCTGAAA TCCGCAGTGA TATTACCGGG CGCTTAGCGA CGTACATCGC TGACCCGCAG GTGGACGTTA ATATCGCCGC CTTCCGCTCA CAAAAGGCCT ATATCTCCGG TCAGGTGAAT AAATCCGGTC AACAGGCGAT CACCAACGTG CCACTGACTA TTCTCGACGC CATCAACGCC GCAGGTGGCC TGACCGACAC CGCTGACTGG CGCAACGTAG TGCTAACACA CAATGGTCGT GAAGAACGCA TTTCTTTACA GGCGCTGATG CAAAACGGCG ACCTCAATCA GAACCGACTG CTTTATCCCG GCGATATTCT CTACGTGCCC CGTAATGATG ATCTGAAAGT ATTTGTGATG GGTGAAGTGA AGAAACAGAG CACCCTGAAA ATGGACTTTA GCGGCATGAC CCTGACTGAA GCTCTGGGCA ATGCTGAAGG TATCGACATG ACCACCTCCA ACGCCAGCGG CATCTTTGTC ATTCGTCCGC TGAAAGGCGA GGGCGGGCGT AATGGCAAGA TTGCCAATAT CTACCAGCTG GATATGTCCG ATGCCACGTC GCTGGTGATG GCGACAGAAT TCCGCCTGCA ACCTTATGAC GTGGTGTATG TCACCACCGC CCCGGTTTCC CGCTGGAACC GTCTGATCAA TCAGTTGCTG CCAACTATTA GCGGTGTCCG TTACATGACG GATACAGCCA GCGACATTCA TAACTGGTAA
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Protein sequence | MMKSKMKLMP LLVSVTLISG CTVLPGSNMS TMGKDVIKQQ DADFDLDKMV NVYPLTPRLI DQLRPRPNVA RPNMTLESEI ANYQYRVGPG DVLNVTVWDH PELTTPAGQY RSSSDTGNWV QPDGTMFYPY IGKVHVVGKT LAEIRSDITG RLATYIADPQ VDVNIAAFRS QKAYISGQVN KSGQQAITNV PLTILDAINA AGGLTDTADW RNVVLTHNGR EERISLQALM QNGDLNQNRL LYPGDILYVP RNDDLKVFVM GEVKKQSTLK MDFSGMTLTE ALGNAEGIDM TTSNASGIFV IRPLKGEGGR NGKIANIYQL DMSDATSLVM ATEFRLQPYD VVYVTTAPVS RWNRLINQLL PTISGVRYMT DTASDIHNW
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