| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1515 |
|---|
| Symbol | |
|---|
| ID | 6067004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1672964 |
|---|
| End bp | 1675261 |
|---|
| Gene Length | 2298 bp |
|---|
| Protein Length | 765 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641600934 |
|---|
| Product | glycoside hydrolase family 3 protein |
|---|
| Protein accession | YP_001724504 |
|---|
| Protein GI | 170019550 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGC TATGTTCAGT AGGAATCGCG GTGAGTCTGG CCCTGCAGCC AGCACTGGCG
GATGATTTAT TCGGCAACCA TCCATTAACG CCCGAAGCGC GGGATGCGTT CGTCACCGAA
CTGCTTAAGA AAATGACAGT TGATGAGAAA ATTGGTCAGC TGCGCTTAAT CAGCGTCGGC
CCGGATAACC CGAAAGAGGC GATCCGCGAG ATGATCAAAG ACGGTCAGGT TGGGGCGATT
TTCAACACCG TAACCCGTCA GGATATCCGC GCCATGCAGG ATCAGGTGAT GGAATTAAGC
CGCCTGAAAA TTCCTCTTTT CTTTGCTTAC GACGTGCTGC ACGGTCAGCG CACGGTGTTC
CCGATTAGCC TCGGTCTGGC CTCGTCTTTT AACCTCGATG CAGTGAAAAC GGTCGGACGT
GTCTCTGCTT ATGAAGCGGC AGATGATGGC CTGAATATGA CCTGGGCACC GATGGTCGAT
GTCTCGCGCG ATCCGCGCTG GGGACGTGCT TCCGAAGGTT TTGGCGAAGA TACGTATCTC
ACCTCAACAA TGGGTAAAAC CATGGTGGAA GCGATGCAGG GTAAAAGCCC GGCAGATCGC
TACTCGGTGA TGACCAGCGT CAAACACTTT GCCGCATACG GCGCGGTAGA AGGCGGTAAA
GAGTACAACA CCGTCGATAT GAGTCCGCAG CGCCTGTTTA ACGACTATAT GCCGCCGTAC
AAAGCGGGGC TGGACGCAGG CAGCGGCGCG GTGATGGTGG CGCTGAACTC GCTGAACGGC
ACGCCAGCCA CCTCCGATTC CTGGCTGCTG AAAGATGTTC TGCGCGACCA GTGGGGTTTT
AAAGGCATCA CCGTTTCCGA TCACGGTGCA ATCAAAGAGC TGATTAAACA TGGCACGGCG
GCAGATCCGG AAGATGCGGT GCGCGTGGCG CTGAAATCCG GCATCAACAT GAGCATGAGC
GACGAGTACT ACTCGAAGTA TCTGCCTGGG TTGATCAAAT CCGGCAAAGT GACGATGGAA
GAGCTGGACG ATGCTGCCCG CCATGTACTG AACGTTAAAT ATGATATGGG ATTGTTTAAC
GACCCATACA GCCATTTGGG GCCGAAAGAG TCTGACCCGG TGGATACCAA TGCCGAAAGC
CGCCTGCACC GTAAAGAAGC GCGTGAAGTG GCGCGCGAAA GCCTGGTGTT GCTGAAAAAC
CGTCTCGAAA CGTTACCGCT GAAAAAATCG GCCACCATTG CGGTGGTTGG GCCACTGGCG
GACAGTAAAC GTGACGTGAT GGGCAGCTGG TCCGCAGCCG GTGTTGCCGA TCAATCCGTG
ACCGTACTGA CCGGGATTAA AAATGCCGTC GGTGAAAACG GTAAAGTGCT GTATGCCAAA
GGGGCGAACG TTACCAGTGA CAAAGGCATT ATCGATTTCC TGAATCAGTA TGAAGAAGCG
GTCAAAGTCG ATCCGCGCTC GCCGCAAGAG ATGATTGATG AAGCGGTGCA GACTGCGAAA
CAATCTGATG TGGTGGTGGC TGTGGTCGGT GAAGCACAGG GGATGGCGCA CGAGGCCTCC
AGCCGTACCG ATATCACTAT TCCGCAAAGC CAACGTGACT TGATTGCGGC GCTGAAAGCC
ACCGGTAAAC CGCTGGTGCT GGTGCTTATG AACGGGCGTC CGCTGGCGCT GGTGAAAGAA
GATCAGCAGG CTGATGCGAT TCTGGAAACC TGGTTTGCGG GGACTGAAGG CGGTAATGCA
ATTGCCGATG TGTTGTTTGG CGATTACAAC CCGTCCGGCA AGCTGCCGAT GTCCTTCCCG
CGTTCTGTCG GGCAGATCCC GGTGTACTAC AGCCATCTGA ACACCGGTCG TCCGTATAAT
GCCGACAAGC CGAACAAATA CACTTCGCGT TATTTTGATG AAGCTAACGG GGCGCTTTAT
CCGTTCGGCT ATGGTCTGAG CTATACCACT TTCACCGTCT CTGATGTGAA ACTTTCTGCG
CCGACCATGA AGCGTGACGG CAAAGTGACG GCCAGCGTGC AGGTGACGAA CACCGGTAAG
CGCGAGGGTG CCACGGTAGT GCAGATGTAC TTGCAGGATG TGACGGCTTC TATGAGCCGC
CCAGTGAAGC AGCTGAAAGG CTTTGAGAAA ATCACCCTGA AGCCGGGCGA AACTCAGACC
GTCAGCTTCC CGATTGATAT TGAGGCGCTG AAGTTCTGGA ATCAACAGAT GAAATATGAC
GCCGAGCCTG GCAAGTTCAA TGTCTTTATC GGCACTGATT CCGCACGCGT TAAGAAAGGC
GAGTTTGAGT TGCTGTAA
|
|---|
| Protein sequence | MKWLCSVGIA VSLALQPALA DDLFGNHPLT PEARDAFVTE LLKKMTVDEK IGQLRLISVG
PDNPKEAIRE MIKDGQVGAI FNTVTRQDIR AMQDQVMELS RLKIPLFFAY DVLHGQRTVF
PISLGLASSF NLDAVKTVGR VSAYEAADDG LNMTWAPMVD VSRDPRWGRA SEGFGEDTYL
TSTMGKTMVE AMQGKSPADR YSVMTSVKHF AAYGAVEGGK EYNTVDMSPQ RLFNDYMPPY
KAGLDAGSGA VMVALNSLNG TPATSDSWLL KDVLRDQWGF KGITVSDHGA IKELIKHGTA
ADPEDAVRVA LKSGINMSMS DEYYSKYLPG LIKSGKVTME ELDDAARHVL NVKYDMGLFN
DPYSHLGPKE SDPVDTNAES RLHRKEAREV ARESLVLLKN RLETLPLKKS ATIAVVGPLA
DSKRDVMGSW SAAGVADQSV TVLTGIKNAV GENGKVLYAK GANVTSDKGI IDFLNQYEEA
VKVDPRSPQE MIDEAVQTAK QSDVVVAVVG EAQGMAHEAS SRTDITIPQS QRDLIAALKA
TGKPLVLVLM NGRPLALVKE DQQADAILET WFAGTEGGNA IADVLFGDYN PSGKLPMSFP
RSVGQIPVYY SHLNTGRPYN ADKPNKYTSR YFDEANGALY PFGYGLSYTT FTVSDVKLSA
PTMKRDGKVT ASVQVTNTGK REGATVVQMY LQDVTASMSR PVKQLKGFEK ITLKPGETQT
VSFPIDIEAL KFWNQQMKYD AEPGKFNVFI GTDSARVKKG EFELL
|
|---|
| |