Gene EcolC_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1475 
Symbol 
ID6067202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1627463 
End bp1628929 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content52% 
IMG OID641600895 
Productmannitol dehydrogenase domain-containing protein 
Protein accessionYP_001724465 
Protein GI170019511 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0453772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000115044 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACAA TTGCCTCCGT TACGCTCCCG CATCATGTAC ACGCTCCACG CTACGATCGC 
CAGCAGTTGC AATCACGTAT CGTTCATTTT GGCTTTGGCG CCTTTCACCG CGCTCATCAG
GCGTTACTGA CCGATCGTGT GCTGAATGCC CAGGGCGGCG ACTGGGGGAT CTGTGAAATC
AGCTTGTTCA GCGGTGATCA ACTGATGAGC CAGCTCCGCG CACAGAACCA TTTATATACC
GTGCTGGAGA AAGGTGCGGA CGGCAATCAG GTGATAATTG TCGGTGCCGT TCACGAATGC
CTTAATGCAA AACTGGATTC CTTAGCGGCA ATTATTGAGA AATTTTGCGA GCCACAGGTG
GCAATTGTTT CCCTGACGAT TACCGAAAAA GGCTATTGTA TTGACCCGGC CACCGGTGCA
CTCGACACCA GTAATCCGCG GATTATTCAC GATCTACAAA CCCCTGAAGA ACCTCACTCC
GCACCGGGTA TTCTCGTCGA AGCACTGAAA CGCCGCCGTG AGCGCGGCCT TACACCGTTT
ACCGTGCTCT CCTGCGACAA TATTCCCGAC AATGGTCATG TGGTGAAAAA CGCGGTGCTG
GGAATGGCAG AAAAACGTTC GCCAGAACTC GCCGGGTGGA TAAAAGAGCA CGTCAGTTTT
CCGGGAACCA TGGTCGACCG CATTGTTCCG GCTGCAACCG ACGAATCACT GGTGGAAATC
AGCCAGCATC TGGGGGTGAA TGATCCCTGC GCGATTAGCT GCGAACCGTT TATCCAGTGG
GTGGTGGAAG ATAACTTCGT CGCTGGGCGT CCTGCCTGGG AAGTCGCAGG TGTACAAATG
GTGAATGATG TCCTGCCATG GGAAGAGATG AAACTGCGGA TGCTTAATGG CAGCCACTCT
TTTCTCGCTT ATCTGGGTTA CCTCTCAGGA TTCGCCCATA TCAGTGATTG CATGCAGGAT
CGCGCATTTC GCCATGCCGC CAGAACATTA ATGCTGGATG AGCAAGCGCC GACACTGCAA
ATTAAAGATG TCGATTTAAC ACAATATGCG GATAAGTTAA TTGCACGTTT TGCTAATCCG
GCGCTGAAAC ATAAGACCTG GCAAATCGCG ATGGATGGCA GCCAGAAATT ACCGCAACGC
ATGCTGGCAG GTATTCGCAT ACATCAGGGG CGCGAAACGG ACTGGTCGTT GCTGGCATTA
GGCGTTGCAG GCTGGATGCG TTACGTCAGC GGCGTTGATG ATGCCGGAAA TGCCATTGAT
GTTCGCGATC CGCTTAGCGA TAAAATTCGC GAACTTGTTG CGGGCAGCAG CAGTGAACAA
CGCGTAACCG CCCTGCTTTC CCTGCGTGAA GTTTTCGGTG ATGATCTGCC AGATAACCCG
CATTTTGTGC AGGCCATCGA ACAAGCCTGG CAACAAATCG TACAATTCGG CGCACATCAG
GCGCTATTAA ACACCCTCAA AATTTAA
 
Protein sequence
MKTIASVTLP HHVHAPRYDR QQLQSRIVHF GFGAFHRAHQ ALLTDRVLNA QGGDWGICEI 
SLFSGDQLMS QLRAQNHLYT VLEKGADGNQ VIIVGAVHEC LNAKLDSLAA IIEKFCEPQV
AIVSLTITEK GYCIDPATGA LDTSNPRIIH DLQTPEEPHS APGILVEALK RRRERGLTPF
TVLSCDNIPD NGHVVKNAVL GMAEKRSPEL AGWIKEHVSF PGTMVDRIVP AATDESLVEI
SQHLGVNDPC AISCEPFIQW VVEDNFVAGR PAWEVAGVQM VNDVLPWEEM KLRMLNGSHS
FLAYLGYLSG FAHISDCMQD RAFRHAARTL MLDEQAPTLQ IKDVDLTQYA DKLIARFANP
ALKHKTWQIA MDGSQKLPQR MLAGIRIHQG RETDWSLLAL GVAGWMRYVS GVDDAGNAID
VRDPLSDKIR ELVAGSSSEQ RVTALLSLRE VFGDDLPDNP HFVQAIEQAW QQIVQFGAHQ
ALLNTLKI