| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1411 |
|---|
| Symbol | glpT |
|---|
| ID | 6067811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1544146 |
|---|
| End bp | 1545504 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641600830 |
|---|
| Product | sn-glycerol-3-phosphate transporter |
|---|
| Protein accession | YP_001724401 |
|---|
| Protein GI | 170019447 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter
[TIGR00881] phosphoglycerate transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.476503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGTA TTTTTAAACC AGCGCCACAC AAAGCGCGCT TACCTGCCGC GGAGATCGAT
CCGACTTATC GTCGATTGCG CTGGCAAATT TTCCTGGGGA TATTCTTTGG CTATGCGGCT
TACTATTTGG TTCGTAAGAA CTTTGCGCTT GCTATGCCTT ATCTGGTTGA GCAGGGATTC
TCACGCGGTG ATTTAGGTTT TGCCCTTTCG GGGATCTCGA TTGCTTATGG ATTTTCGAAA
TTCATCATGG GTTCGGTATC GGATCGCTCG AATCCGCGCG TTTTCCTGCC CGCAGGTTTG
ATTCTGGCGG CGGCAGTGAT GTTGTTTATG GGCTTTGTGC CATGGGCGAC GTCGAGCATT
GCGGTGATGT TTGTACTGTT GTTCCTCTGC GGTTGGTTCC AGGGGATGGG GTGGCCGCCG
TGTGGTCGTA CTATGGTGCA CTGGTGGTCG CAGAAAGAAC GTGGCGGCAT TGTGTCAGTG
TGGAACTGTG CGCACAACGT CGGTGGTGGT ATTCCGCCGC TGCTGTTCCT GCTGGGGATG
GCCTGGTTCA ATGACTGGCA TGCGGCGCTC TATATGCCTG CTTTCTGCGC CATTCTGGTG
GCATTATTCG CCTTTGCGAT GATGCGCGAT ACCCCGCAAT CCTGTGGCTT GCCGCCGATC
GAAGAGTACA AAAATGATTA TCCGGACGAC TATAACGAAA AAGCGGAACA GGAGCTGACG
GCGAAGCAAA TCTTCATGCA GTACGTACTG CCGAACAAAC TGCTGTGGTA TATCGCCATC
GCCAACGTGT TCGTTTATCT GCTGCGTTAC GGCATCCTCG ACTGGTCACC GACTTATCTG
AAAGAGGTTA AGCATTTCGC GCTAGATAAA TCCTCCTGGG CCTACTTCCT TTATGAATAT
GCAGGTATTC CGGGCACTCT GCTGTGCGGC TGGATGTCGG ATAAAGTCTT CCGTGGCAAC
CGTGGGGCAA CCGGCGTTTT CTTTATGACA CTGGTGACCA TCGCGACTAT CGTTTACTGG
ATGAACCCGG CAGGTAACCC AACCGTCGAT ATGATTTGTA TGATTGTTAT CGGCTTCCTG
ATCTACGGTC CTGTGATGCT GATCGGTCTG CATGCGCTGG AACTGGCACC GAAAAAAGCG
GCAGGTACGG CAGCGGGCTT TACCGGGCTG TTTGGTTACC TGGGCGGTTC GGTGGCGGCG
AGCGCGATTG TTGGCTACAC CGTGGACTTC TTCGGCTGGG ATGGCGGCTT TATGGTAATG
ATTGGCGGCA GCATTCTGGC GGTTATCTTG TTGATTGTTG TGATGATTGG CGAAAAACGT
CGCCATGAAC AATTACTGCA AGAACGCAAC GGAGGCTAA
|
|---|
| Protein sequence | MLSIFKPAPH KARLPAAEID PTYRRLRWQI FLGIFFGYAA YYLVRKNFAL AMPYLVEQGF
SRGDLGFALS GISIAYGFSK FIMGSVSDRS NPRVFLPAGL ILAAAVMLFM GFVPWATSSI
AVMFVLLFLC GWFQGMGWPP CGRTMVHWWS QKERGGIVSV WNCAHNVGGG IPPLLFLLGM
AWFNDWHAAL YMPAFCAILV ALFAFAMMRD TPQSCGLPPI EEYKNDYPDD YNEKAEQELT
AKQIFMQYVL PNKLLWYIAI ANVFVYLLRY GILDWSPTYL KEVKHFALDK SSWAYFLYEY
AGIPGTLLCG WMSDKVFRGN RGATGVFFMT LVTIATIVYW MNPAGNPTVD MICMIVIGFL
IYGPVMLIGL HALELAPKKA AGTAAGFTGL FGYLGGSVAA SAIVGYTVDF FGWDGGFMVM
IGGSILAVIL LIVVMIGEKR RHEQLLQERN GG
|
|---|
| |