Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1409 |
Symbol | |
ID | 6067831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1540996 |
End bp | 1542255 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641600828 |
Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
Protein accession | YP_001724399 |
Protein GI | 170019445 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.898799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.665816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTTG ATACTGTCAT TATGGGCGGC GGCCTCGCCG GATTACTCTG TGGCCTGCAA CTGCAAAAAC ACGGCCTGCG CTGTGCCATT GTCACTCGTG GTCAAAGCGC ACTGCATTTC TCATCCGGAT CGCTGGATTT GCTGAGCCAT CTGCCAGATG GTCAACCGGT GACAGACATT CACAGTGGAC TGGAATCTTT GCGTCAGCAG GCACCAGCCC ATCCTTACAG TCTTCTCGAG CCACAACGCG TGCTCGATCT CGCTTGCCAG GCGCAGGCAT TAATCGCTGA AAGCGGTGCG CAATTGCAGG GCAGCGTAGA ACTTGCTCAC CAGCGGGTTA CGCCGCTCGG CACTCTGCGC TCTACCTGGC TAAGTTCGCC AGAAGTCCCC GTCTGGCCGC TGCCCGCGAA GAAAATATGT GTAGTGGGAA TTAGCGGCCT GATGGATTTT CAGGCGCACC TTGCGGCAGC TTCGTTGCGT GAACTCGGCC TTGCCGTTGA AACCGCAGAA ATAGAGCTGC CGGAACTGGA TGTGCTGCGC AATAACGCCA CCGAATTTCG CGCGGTGAAT ATCGCCCGTT TCCTTGATAA TGAAGAAAAC TGGCCGCTGT TACTTGATGC GCTTATTCCT GTCGCCAATA CCTGCGAAAT GATCCTGATG CCCGCCTGCT TCGGTCTGGC CGATGACAAA CTGTGGCGTT GGTTGAATGA AAAACTACCT TGTTCACTGA TGCTTTTGCC AACGCTGCCG CCTTCCGTGC TGGGCATTCG TCTGCAAAAC CAGTTACAGC GCCAGTTTGT GCGCCAGGGT GGCGTGTGGA TGCCGGGCGA TGAAGTGAAA AAAGTGACCT GTAAAAATGG CGTAGTGAAC GAAATCTGGA CCCGCAATCA CGCCGATATT CCGCTACGTC CACGTTTCGC GGTTCTCGCC AGCGGCAGTT TCTTTAGTGG CGGACTGGTA GCGGAACGTA ACGGCATTCG AGAGCCGATT CTCGGCCTTG ATGTGCTACA AACCGCCACG CGGGGTGAAT GGTATAAGGG AGATTTTTTT GCGCCGCAAC CGTGGCAGCA GTTCGGTGTA ACCACTGATG AGACGCTACG CCCGTCACAG GCAGGGCAAA CCATTGAAAA CCTGTTTGCC ATCGGTTCGG TGCTGGGCGG ATTTGATCCC ATCGCCCAGG GATGCGGCGG CGGTGTTTGT GCCGTCAGTG CTTTACATGC CGCTCAACAG ATTGCCCAAC GCGCAGGAGG CCAACAATGA
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Protein sequence | MRFDTVIMGG GLAGLLCGLQ LQKHGLRCAI VTRGQSALHF SSGSLDLLSH LPDGQPVTDI HSGLESLRQQ APAHPYSLLE PQRVLDLACQ AQALIAESGA QLQGSVELAH QRVTPLGTLR STWLSSPEVP VWPLPAKKIC VVGISGLMDF QAHLAAASLR ELGLAVETAE IELPELDVLR NNATEFRAVN IARFLDNEEN WPLLLDALIP VANTCEMILM PACFGLADDK LWRWLNEKLP CSLMLLPTLP PSVLGIRLQN QLQRQFVRQG GVWMPGDEVK KVTCKNGVVN EIWTRNHADI PLRPRFAVLA SGSFFSGGLV AERNGIREPI LGLDVLQTAT RGEWYKGDFF APQPWQQFGV TTDETLRPSQ AGQTIENLFA IGSVLGGFDP IAQGCGGGVC AVSALHAAQQ IAQRAGGQQ
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