Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1408 |
Symbol | glpC |
ID | 6067836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1539809 |
End bp | 1540999 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641600827 |
Product | sn-glycerol-3-phosphate dehydrogenase subunit C |
Protein accession | YP_001724398 |
Protein GI | 170019444 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.689571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGACA CCAGCTTCGA AAACTGCATT AAGTGCACCG TCTGCACCAC CGCCTGCCCG GTGAGCCGGG TGAATCCCGG TTATCCAGGG CCAAAACAAG CCGGGCCGGA TGGCGAGCGT CTGCGTTTGA AAGATGGCGC ACTGTATGAC GAGGCGCTGA AATATTGCAT CAACTGCAAA CGTTGTGAAG TCGCCTGCCC GTCCGATGTG AAGATTGGCG ATATTATCCA GCGCGCGCGG GCGAAATATG ACACCACGCG CCCGTCGCTG CGTAATTTTG TGTTGAGTCA TACCGACCTG ATGGGTAGCG TTTCCACGCC GTTCGCACCA ATCGTCAACA CCGCTACCTC GCTGAAACCG GTGCGGCAGC TGCTTGATGC GGCGTTAAAA ATCGATCATC GCCGCACGCT ACCGAAATAC TCCTTCGGCA CGTTCCGTCG CTGGTATCGC AGCGTGGCGG CTCAGCAAGC ACAATATAAA GACCAGGTCG CTTTCTTTCA CGGCTGCTTC GTTAACTACA ACCATCCGCA GTTAGGTAAA GATTTAATTA AAGTGCTCAA CGCAATGGGT ACCGGTGTAC AACTGCTCAG CAAAGAAAAA TGCTGCGGCG TACCGCTAAT CGCCAACGGC TTTACCGATA AAGCACGCAA ACAGGCAATT ACGAATGTAG AGTCGATCCG CGAAGCTGTG GGAGTAAAAG GCATTCCGGT GATTGCCACC TCCTCAACCT GTACATTTGC CCTGCGCGAC GAATACCCGG AAGTGCTGAA TGTCGACAAC AAAGGCTTGC GCGATCATAT CGAACTGGCA ACCCGCTGGC TGTGGCGCAA GCTGGACGAA GGCAAAACGT TACCGCTGAA ACCGCTGCCG CTGAAAGTGG TTTATCACAC TCCGTGCCAT ATGGAAAAAA TGGGCTGGAC GCTCTACACC CTGGAGCTGT TGCGTAACAT CCCGGGGCTT GAGTTAACGG TGCTGGATTC CCAGTGCTGC GGTATTGCGG GTACTTACGG TTTCAAAAAA GAGAACTACC CCACCTCACA AGCCATCGGC GCACCACTGT TCCGCCAGAT AGAAGAAAGC GGCGCAGATC TGGTGGTCAC CGACTGCGAA ACCTGTAAAT GGCAGATTGA GATGTCCACA AGTCTTCGCT GCGAACATCC GATTACGCTA CTGGCCCAGG CGCTGGCTTA A
|
Protein sequence | MNDTSFENCI KCTVCTTACP VSRVNPGYPG PKQAGPDGER LRLKDGALYD EALKYCINCK RCEVACPSDV KIGDIIQRAR AKYDTTRPSL RNFVLSHTDL MGSVSTPFAP IVNTATSLKP VRQLLDAALK IDHRRTLPKY SFGTFRRWYR SVAAQQAQYK DQVAFFHGCF VNYNHPQLGK DLIKVLNAMG TGVQLLSKEK CCGVPLIANG FTDKARKQAI TNVESIREAV GVKGIPVIAT SSTCTFALRD EYPEVLNVDN KGLRDHIELA TRWLWRKLDE GKTLPLKPLP LKVVYHTPCH MEKMGWTLYT LELLRNIPGL ELTVLDSQCC GIAGTYGFKK ENYPTSQAIG APLFRQIEES GADLVVTDCE TCKWQIEMST SLRCEHPITL LAQALA
|
| |