Gene EcolC_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1404 
Symbol 
ID6067853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1537675 
End bp1538478 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content53% 
IMG OID641600824 
Productputative aldolase 
Protein accessionYP_001724395 
Protein GI170019441 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.174017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT TATTAAGCAA TCCCTTTAAA GAACGTTTAC GCAAGGGCGA AGTGCAAATT 
GGTCTGTGGT TAAGCTCAAC GACTGCCTAT ATGGCAGAAA TTGCCGCCAC TTCTGGTTAT
GACTGGTTGC TGATTGACGG GGAGCACGCG CCAAACACCA TTCAGGATCT TTATCATCAG
CTACAGGCGG TAGCGCCCTA TGCCAGCCAA CCCGTGATCC GTCCGGTGGA AGGCAGTAAA
CCGCTGATTA AACAAGTCCT GGATATTGGC GCGCAAACTC TACTGATCCC GATGGTCGAT
ACTGCCGAAC AGGCACGTCA GGTGGTGTCT GCCACGCGCT ATCCTCCTTA CGGTGAGCGT
GGTGTCGGGG CCAGTGTGGC ACGGGCTGCG CGCTGGGGAC GCATTGAGAA TTACATGGCG
CAAGTTAACG ATTCGCTTTG TCTGTTGGTG CAGGTGGAAA GTAAAACGGC ACTGGATAAC
CTGGACGAAA TCCTCGACGT CGAAGGGATT GATGGCGTGT TTATTGGACC TGCGGATCTT
TCTGCGTCGT TGGGCTACCC GGATAACGCC GGGCACCCGG AAGTGCAGCG AATTATTGAA
ACCAGTATTC GGCGGATCCG TGCTGCGGGT AAAGCGGCTG GTTTTCTGGC TGTGGCTCCT
GATATGGCGC AGCAATGCCT GGCGTGGGGA GCGAACTTTG TCGCTGTTGG CGTTGACACG
ATGCTCTACA GCGATGCCCT GGATCAACGA CTGGCGATGT TTAAATCAGG CAAAAATGGG
CCACGCATAA AAGGTAGTTA TTGA
 
Protein sequence
MNALLSNPFK ERLRKGEVQI GLWLSSTTAY MAEIAATSGY DWLLIDGEHA PNTIQDLYHQ 
LQAVAPYASQ PVIRPVEGSK PLIKQVLDIG AQTLLIPMVD TAEQARQVVS ATRYPPYGER
GVGASVARAA RWGRIENYMA QVNDSLCLLV QVESKTALDN LDEILDVEGI DGVFIGPADL
SASLGYPDNA GHPEVQRIIE TSIRRIRAAG KAAGFLAVAP DMAQQCLAWG ANFVAVGVDT
MLYSDALDQR LAMFKSGKNG PRIKGSY