Gene EcolC_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1401 
Symbol 
ID6067878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1534309 
End bp1535091 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content51% 
IMG OID641600821 
ProductIclR family transcriptional regulator 
Protein accessionYP_001724392 
Protein GI170019438 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.509968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAT CAAGCAAAGT TCCCGCCCTG ACACGGGCTA TTGATATTCT CAATTTGATT 
GCCCGCATTG GCCCCTGTAG TGCTGCGACG ATCATTGACA CATTGGGAAT CCCTAAAAGC
ACGGCCTATT TGCTGCTTAA TGAACTCAGG CGTCAGCGTT TTCTTAGCCT TGATCACCAG
GAAAATTTTT GTTTGTGGAC CAGGCTGGTG GAGCTTTCCG GTCATGCGTT AAGCAAGATG
GATCTCCGGG AACTGGCTCG ACCGCGTTTG ACGCAACTGA TGGATACCAC CGGGCTGTTA
TGTCACCTGG GGATTATTGA TAACGGCAGC GCTTATTACA TTTTGAAAGT GGAGTCATCA
GCCACTATCA GCGTGCGTTC CCATGAAGGA AAAAGCCTTT CGCTTTATCG CTCCGGAATA
GGTAAATGCC TGCTTGCCTG GCAACCTGCA GCGGTACAGC AAAGTATTAT CGAAGGGCTG
GTCTGGGAGC AGGCGACACC CACAACGATT ACTCATCCAC AGCAACTTCA CGAAGAACTG
GCGCGTATTC GCCGTCAGGG CTGGAGCTAT GACAACGGCG AAGATTACGC CGATGTCCGT
TGTGTCGCTG CGCCGGTGTT TAACGCCAAT AACGAGCTTA CCGCTGCGAT CTCGGTGGTC
GGTACCCGCT TACAAATCAA TGAAGAATAC CGTGATTATC TGGCGGGCAA GGCCATTGCC
TGCGCCAGGG ATATTTCACG TCTGTTGGGA TGGAAAAGTC CCTTTGACTT ACAAGCCTCA
TAA
 
Protein sequence
MLESSKVPAL TRAIDILNLI ARIGPCSAAT IIDTLGIPKS TAYLLLNELR RQRFLSLDHQ 
ENFCLWTRLV ELSGHALSKM DLRELARPRL TQLMDTTGLL CHLGIIDNGS AYYILKVESS
ATISVRSHEG KSLSLYRSGI GKCLLAWQPA AVQQSIIEGL VWEQATPTTI THPQQLHEEL
ARIRRQGWSY DNGEDYADVR CVAAPVFNAN NELTAAISVV GTRLQINEEY RDYLAGKAIA
CARDISRLLG WKSPFDLQAS