Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1362 |
Symbol | |
ID | 6068149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1492146 |
End bp | 1493363 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641600784 |
Product | aminotransferase AlaT |
Protein accession | YP_001724355 |
Protein GI | 170019401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.594502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCCA TTGAAAAATC CAGCAAATTA GAGAATGTCT GTTATGACAT CCGTGGTCCG GTGCTGAAAG AAGCAAAACG CCTGGAAGAA GAAGGTAACA AGGTACTGAA ACTGAACATC GGCAACCCAG CCCCGTTCGG TTTTGACGCG CCAGATGAAA TCCTCGTTGA CGTGATACGC AACCTGCCTA CCGCTCAAGG GTATTGCGAT TCCAAAGGTC TTTACTCCGC GCGTAAAGCC ATCATGCAGC ACTACCAGGC TCGTGGCATG CGTGATGTTA CCGTGGAAGA TATTTACATC GGCAATGGTG TATCGGAGCT TATCGTTCAG GCAATGCAGG CATTGCTGAA CAGCGGGGAC GAAATGTTGG TTCCTGCACC AGATTACCCA CTATGGACCG CGGCGGTTTC GCTTTCCAGC GGTAAAGCGG TGCATTATCT TTGCGATGAA TCCTCTGACT GGTTCCCGGA CCTCGATGAT ATTCGCGCTA AAATTACGCC TCGTACGCGT GGGATCGTTA TTATCAACCC AAATAACCCA ACCGGCGCGG TATATTCCAA AGAGCTTTTA ATGGAGATTG TGGAGATTGC ACGTCAGCAT AATCTCATTA TCTTCGCCGA TGAAATTTAT GACAAAATTC TCTACGACGA CGCTGAGCAT CACTCAATTG CACCGCTGGC ACCTGACCTG CTGACCATTA CCTTTAACGG ACTGTCGAAA ACGTACCGCG TTGCAGGCTT CCGTCAGGGG TGGATGGTGT TGAACGGGCC GAAAAAACAC GCCAAAGGCT ACATCGAAGG TCTGGAAATG CTGGCTTCAA TGCGCCTGTG TGCTAACGTT CCTGCGCAAC ACGCCATTCA GACCGCGCTG GGTGGTTATC AGAGCATCAG TGAATTTATT ACCCCTGGCG GTCGTCTTTA TGAGCAGCGT AACCGCGCGT GGGAACTGAT CAACGATATT CCGGGCGTTT CCTGCGTGAA ACCTCGTGGT GCGCTGTATA TGTTCCCGAA AATCGACGCC AAACGCTTTA ACATTCACGA CGATCAGAAA ATGGTGCTGG ATTTCCTGTT GCAGGAAAAA GTTCTGTTGG TGCAAGGGAC GGCATTCAAC TGGCCGTGGC CGGATCACTT CCGCATTGTC ACGCTACCGC GTGTCGATGA TATCGAGCTG TCTTTGAGCA AGTTCGCGCG TTTCCTTTCT GGTTATCATC AGCTGTAA
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Protein sequence | MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFDA PDEILVDVIR NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI GNGVSELIVQ AMQALLNSGD EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE SSDWFPDLDD IRAKITPRTR GIVIINPNNP TGAVYSKELL MEIVEIARQH NLIIFADEIY DKILYDDAEH HSIAPLAPDL LTITFNGLSK TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI TPGGRLYEQR NRAWELINDI PGVSCVKPRG ALYMFPKIDA KRFNIHDDQK MVLDFLLQEK VLLVQGTAFN WPWPDHFRIV TLPRVDDIEL SLSKFARFLS GYHQL
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