Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1338 |
Symbol | |
ID | 6068224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1469239 |
End bp | 1469901 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641600760 |
Product | hypothetical protein |
Protein accession | YP_001724331 |
Protein GI | 170019377 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAGTA AGTTTCAGAA TCGGTTAGTG GGCACGATCG TGCTGGTGGC GCTGGGGGTG ATTGTACTTC CAGGGCTGCT GGACGGGCAG AAAAAACATT ATCAGGATGA GTTCGCGGCT ATCCCGCTGG TGCCGAAAGC GGGCGATCGT GATGAGCCTG ATATGATGCC AGCCGCCACC CAGGCGTTGC CGACGCAGCC GCCGGAAGGC GCAGCGGAAG AGGTGCGGGC AGGTGATGCC GCAGCACCGT CGCTCGATCC GGCCACTATT GCAGCCAATA ACACCGAGTT TGAACCGGAA CCTGCACCGG TCGCCCCACC GAAGCCGAAA CCGGTGGAGC CGCCTAAACC GAAGGTTGAA GCACCACCTG CGCCGAAGCC AGAACCGAAG CCGGTCGTGG AAGAAAAAGC TGCACCGACG GGTAAAGCCT ATGTTGTGCA ACTGGGTGCG CTGAAAAATG CCGATAAAGT GAATGAGATT GTCGGTAAGC TGCGCGGTGC CGGTTATCGG GTTTATACGT CGCCATCCAC GCCAGTGCAG GGTAAAATTA CCCGTATTCT GGTTGGGCCA GATGCCTCGA AAGATAAGCT GAAAGGTTCG CTGGGTGAGT TGAAGCAACT TTCTGGCTTA AGTGGCGTGG TAATGGGCTA TACGCCGAAT TAA
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Protein sequence | MASKFQNRLV GTIVLVALGV IVLPGLLDGQ KKHYQDEFAA IPLVPKAGDR DEPDMMPAAT QALPTQPPEG AAEEVRAGDA AAPSLDPATI AANNTEFEPE PAPVAPPKPK PVEPPKPKVE APPAPKPEPK PVVEEKAAPT GKAYVVQLGA LKNADKVNEI VGKLRGAGYR VYTSPSTPVQ GKITRILVGP DASKDKLKGS LGELKQLSGL SGVVMGYTPN
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