| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1334 |
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| Symbol | truA |
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| ID | 6068265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1465287 |
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| End bp | 1466099 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641600756 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001724327 |
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| Protein GI | 170019373 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.673735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACC AGCAACAACC GCCAGTTTAT AAAATTGCGC TGGGCATTGA GTACGACGGC
AGTAAGTATT ACGGCTGGCA ACGGCAGAAC GAAGTTCGCA GTGTGCAGGA GAAGCTGGAA
AAGGCGCTCT CCCAGGTGGC GAACGAACCC ATCACCGTCT TCTGCGCCGG GCGTACTGAC
GCAGGGGTAC ACGGTACCGG GCAGGTTGTG CATTTCGAAA CAACCGCGCT GCGCAAAGAC
GCGGCGTGGA CCTTGGGCGT AAATGCGAAT TTACCTGGTG ACATCGCTGT GCGTTGGGTT
AAAGCTGTAC CTGATGATTT TCATGCCCGA TTTAGCGCCA CGGCTCGCCG TTATCGCTAC
ATCATCTACA ATCATCGGCT GCGCCCGGCG GTACTGAGTA AAGGGGTAAC CCATTTTTAC
GAACCGCTGG ACGCTGAACG GATGCATCGG GCTGCGCAAT GCTTGCTGGG CGAGAATGAT
TTCACCTCGT TCCGTGCGGT GCAGTGCCAG TCCCGAACCC CGTGGCGCAA CGTTATGCAT
ATTAATGTCA CGCGTCACGG TCCTTATGTG GTGGTAGATA TTAAAGCGAA TGCTTTTGTA
CATCATATGG TCAGGAATAT TGTCGGCAGC CTGATGGAAG TCGGTGCCCA CAACCAGCCG
GAGAGCTGGA TAGCAGAGTT GCTGGCGGCA AAGGACAGAA CGCTGGCGGC AGCAACGGCA
AAAGCGGAAG GGCTGTATCT GGTCGCGGTG GATTACCCTG ACCGGTATGA TCTTCCAAAA
CCGCCAATGG GCCCGCTATT TCTGGCGGAC TAA
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| Protein sequence | MSDQQQPPVY KIALGIEYDG SKYYGWQRQN EVRSVQEKLE KALSQVANEP ITVFCAGRTD
AGVHGTGQVV HFETTALRKD AAWTLGVNAN LPGDIAVRWV KAVPDDFHAR FSATARRYRY
IIYNHRLRPA VLSKGVTHFY EPLDAERMHR AAQCLLGEND FTSFRAVQCQ SRTPWRNVMH
INVTRHGPYV VVDIKANAFV HHMVRNIVGS LMEVGAHNQP ESWIAELLAA KDRTLAAATA
KAEGLYLVAV DYPDRYDLPK PPMGPLFLAD
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