| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1323 |
|---|
| Symbol | |
|---|
| ID | 6068370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1453450 |
|---|
| End bp | 1454535 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641600745 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_001724316 |
|---|
| Protein GI | 170019362 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAA ACACAATTGG ACAACTCTTT CGCGTAACCA CCTTCGGCGA ATCGCATGGG
CTGGCGCTCG GCTGCATCGT CGATGGTGTT CCGCCAGGCA TTCCGCTGAC GGAAGCGGAC
CTGCAACATG ACCTTGATCG TCGTCGCCCT GGGACATCGC GCTATACCAC CCAGCGCCGC
GAGCCGGATC AGGTCAAAAT ACTCTCCGGT GTTTTTGAAG GCGTTACTAC TGGCACCAGC
ATTGGCTTGT TGATCGAAAA TACCGACCAG CGTTCTCAGG ATTATAGTGC GATTAAGGAC
GTCTTCCGTC CGGGTCATGC CGATTACACT TACGAACAAA AATACGGTCT GCGCGATTAT
CGCGGCGGCG GGCGTTCTTC CGCACGCGAA ACCGCCATGC GCGTGGCGGC GGGGGCGATT
GCCAAAAAAT ATCTCGCTGA GAAATTTGGC ATCGAAATTC GCGGCTGCCT GACCCAGATG
GGTGACATTC CGCTGGAAAT CAAAGACTGG TCGCAGGTCG AGCAAAATCC GTTCTTCTGC
CCGGACCCGG ACAAAATCGA CGCGTTAGAT GAACTGATGC GCGCGCTGAA AAAAGAGGGC
GACTCCATCG GCGCGAAAGT CACCGTTGTT GCCAGTGGCG TTCCTGCCGG ACTTGGCGAG
CCGGTCTTTG ACCGCCTGGA TGCTGACATC GCCCATGCGC TGATGAGCAT CAACGCGGTG
AAAGGCGTGG AAATTGGCGA CGGTTTTGAC GTAGTGGCGC TGCGCGGCAG CCAGAACCGC
GACGAAATCA CCAAAGACGG TTTCCAGAGC AACCATGCGG GCGGCATTCT CGGCGGTATC
AGCAGCGGGC AGCAAATCAT TGCTCATATG GCGCTGAAAC CGACCTCCAG CATTACCGTG
CCGGGGCGCA CTATTAACCG CTTTGGCGAA GAAGTTGAGA TGATCACCAA AGGCCGTCAC
GATCCCTGTG TCGGGATCCG TGCAGTGCCG ATCGCTGAAG CGATGCTGGC GATCGTTTTA
ATGGATCACC TGTTACGGCA GCGGGCGCAA AATGCCGATG TGAAGACTGA TATTCCACGC
TGGTAA
|
|---|
| Protein sequence | MAGNTIGQLF RVTTFGESHG LALGCIVDGV PPGIPLTEAD LQHDLDRRRP GTSRYTTQRR
EPDQVKILSG VFEGVTTGTS IGLLIENTDQ RSQDYSAIKD VFRPGHADYT YEQKYGLRDY
RGGGRSSARE TAMRVAAGAI AKKYLAEKFG IEIRGCLTQM GDIPLEIKDW SQVEQNPFFC
PDPDKIDALD ELMRALKKEG DSIGAKVTVV ASGVPAGLGE PVFDRLDADI AHALMSINAV
KGVEIGDGFD VVALRGSQNR DEITKDGFQS NHAGGILGGI SSGQQIIAHM ALKPTSSITV
PGRTINRFGE EVEMITKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRQRAQ NADVKTDIPR
W
|
|---|
| |