| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1317 |
|---|
| Symbol | |
|---|
| ID | 6068436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1449305 |
|---|
| End bp | 1449814 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641600739 |
|---|
| Product | putative fimbrial protein |
|---|
| Protein accession | YP_001724310 |
|---|
| Protein GI | 170019356 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACA AGTTTTTAGC GGGCGCGGGG CTACTGGTAC TGGCCGGATG GGGTGTCAGC
GGTTTAGCCG TTGCTGGCAG CGATATCAAA CAGGTGGATC TGACGCTGCG AATCCTGGTC
GATGGCCCGC CGCCGTGCTC CGTGAAGGGA AGCGCGGTGG AATTTGGCAA TGTGGTGATC
AACAGGATCG ATGGTACCAA TTACCAACAG GATGCGAAAT ACACCCTCAA CTGCGGTAAT
AAAGTCAGCG ATGACTTACG GATGCAGCTC AAAGGCAATA CCGCCGTGAT CAACGGAGAA
ACGGTTCTCA GCACGGATAT CGCCGGCCTG GGGGTGCGGA TAGAAAACGC CGCCGACAAC
TCCCTGTTTG CAGTTGGTGA AAATAACTGG ACGCCTTTTA ATGTCAACAC ACAGCCTCAG
CTGAAAGCGG TGCCGGTAAA ACAGAGCGGG GTGCAACTGA CGCCGTCGGA GTTTAACGCC
ACGATGACCA TGGTGGTGGA TTACCAATGA
|
|---|
| Protein sequence | MSHKFLAGAG LLVLAGWGVS GLAVAGSDIK QVDLTLRILV DGPPPCSVKG SAVEFGNVVI
NRIDGTNYQQ DAKYTLNCGN KVSDDLRMQL KGNTAVINGE TVLSTDIAGL GVRIENAADN
SLFAVGENNW TPFNVNTQPQ LKAVPVKQSG VQLTPSEFNA TMTMVVDYQ
|
|---|
| |