Gene EcolC_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1239 
Symbol 
ID6067290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1359079 
End bp1359966 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content57% 
IMG OID641600654 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_001724232 
Protein GI170019278 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.375205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAA AACAGATTGA AGAAATTGTA CGCAGCGTGA TGGCGTCAAT GGGACAAACG 
GCCCCCGCGC CGTCAGAAGC AAAGTGCGCC ACCACCAACT GTGCGGCACC GGTGACCTCG
GAAAGCTGTG CGCTGGATTT AGGTTCCGCT GAAGCAAAAG CGTGGATTGG TGTTGAAAAC
CCGCATCGCG CAGACGTATT AACAGAACTG CGCCGCAGCA CCGTGGCCCG CGTTTGTACC
GGTCGTGCCG GTCCGCGTCC ACGTACCCAG GCGCTGCTGC GTTTCCTGGC CGATCACTCT
CGTTCGAAAG ATACCGTACT GAAAGAAGTG CCGGAAGAGT GGGTGAAAGC GCAGGGCTTG
CTGGAAGTAC GCTCTGAAAT TAGCGACAAA AATCTCTACC TGACTCGCCC GGATATGGGC
CGCCGCCTGT GTGCAGAAGC TGTTGAAGCG CTGAAAGCAC AGTGTGTTGC TAATCCGGAC
GTACAGGTCG TTATTTCTGA TGGCCTGTCA ACTGATGCCA TCACCGTCAA CTACGAAGAG
ATCCTGCCGC CGCTGATGGC GGGCCTGAAA CAGGCCGGGC TGAAAGTCGG CACGCCATTC
TTTGTTCGTT ATGGTCGCGT GAAGATTGAA GATCAGATCG GTGAGATCCT CGGCGCGAAA
GTGGTGATCC TGCTGGTGGG GGAACGTCCG GGGTTAGGGC AGTCAGAAAG CCTCTCCTGC
TACGCCGTTT ACTCGCCGCG TATGGCGACC ACCGTTGAGG CCGATCGCAC CTGTATCTCT
AACATTCACC AGGGCGGCAC GCCGCCGGTT GAAGCCGCAG CCGTCATTGT GGATTTGGCG
AAACGTATGC TGGAGCAGAA AGCATCCGGC ATCAACATGA CCCGATAA
 
Protein sequence
MDQKQIEEIV RSVMASMGQT APAPSEAKCA TTNCAAPVTS ESCALDLGSA EAKAWIGVEN 
PHRADVLTEL RRSTVARVCT GRAGPRPRTQ ALLRFLADHS RSKDTVLKEV PEEWVKAQGL
LEVRSEISDK NLYLTRPDMG RRLCAEAVEA LKAQCVANPD VQVVISDGLS TDAITVNYEE
ILPPLMAGLK QAGLKVGTPF FVRYGRVKIE DQIGEILGAK VVILLVGERP GLGQSESLSC
YAVYSPRMAT TVEADRTCIS NIHQGGTPPV EAAAVIVDLA KRMLEQKASG INMTR