Gene EcolC_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1195 
Symbol 
ID6065028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1310922 
End bp1311539 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content57% 
IMG OID641600610 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001724188 
Protein GI170019234 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT TTGTGGTGGC CGAACCACTG TGGTGTACAG GATGTAATAC CTGTCTCGCT 
GCCTGTTCGG ACGTGCATAA AACGCAAGGT TTACAGCAAC ACCCGCGCCT GGCCCTGGCG
AAGACGTCAA CAATCACTGC CCCTGTCGTG TGTCATCACT GTGAGGAAGC CCCTTGCCTG
CAGGTCTGCC CGGTCAATGC CATCTCTCAG AGGGATGATG CGATCCAACT CAACGAAAGC
CTCTGTATTG GCTGCAAGCT TTGCGCCGTG GTCTGCCCAT TTGGCGCAAT CAGCGCTTCA
GGAAGCCGTC CGGTGAATGC CCATGCGCAA TATGTTTTTC AGGCTGAAGG CTCACTCAAA
AACGGCGAAG AAAACGTGCT GCCCCAACAT GCGTTGCTGC GCTGGGAACC GGGTGTCCAG
ACCGTCGCGG TGAAATGCGA CCTGTGTGAT TTCTTGCCAG AAGGTCCGGC CTGCGTTCGC
GCTTGCCCGA ATCAGGCGTT ACGGCTGATC ACCGACGATA GCCTGCAACG TCAGATGAAA
GAAAAACAGC GCCTTGCCGC AAGCTGGTTT GCCAATGGCG GGGAGGATCC CCTTTCCCTC
ACTCAGGAGC AACGCTAA
 
Protein sequence
MNRFVVAEPL WCTGCNTCLA ACSDVHKTQG LQQHPRLALA KTSTITAPVV CHHCEEAPCL 
QVCPVNAISQ RDDAIQLNES LCIGCKLCAV VCPFGAISAS GSRPVNAHAQ YVFQAEGSLK
NGEENVLPQH ALLRWEPGVQ TVAVKCDLCD FLPEGPACVR ACPNQALRLI TDDSLQRQMK
EKQRLAASWF ANGGEDPLSL TQEQR