Gene EcolC_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1145 
Symbol 
ID6065229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1249600 
End bp1250340 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID641600561 
ProductRNA methyltransferase 
Protein accessionYP_001724139 
Protein GI170019185 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0763368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAA ATATTCGAAT TGTGCTGGTG GAGACGTCAC ACACCGGCAA TATGGGTTCT 
GTTGCCCGTG CCATGAAAAC AATGGGATTA ACCAATCTGT GGCTGGTTAA TCCACTGGTG
AAACCTGACT CCCAGGCGAT TGCCCTGGCG GCGGGGGCCA GCGATGTGAT TGGTAATGCT
CACATCGTCG ATACGCTCGA CGAAGCGTTA GCCGGTTGTA GCCTGGTGGT GGGCACCAGC
GCACGTTCCC GCACGCTGCC GTGGCCGATG CTCGACCCGC GCGAATGCGG TTTGAAAAGC
GTTGCTGAAG CGGCAAATAC CCCGGTGGCG CTGGTTTTTG GTCGCGAACG TGTCGGCCTG
ACCAATGAAG AGTTGCAGAA ATGCCATTAT CATGTCGCGA TTGCGGCTAA CCCGGAATAC
AGCTCGCTGA ACCTGGCGAT GGCGGTTCAG GTTATTGCCT ATGAAGTGCG CATGGCCTGG
CTGGCAACTC AGGAAAATGG CGAGCAGGTC GAGCATGAAG AGACGCCGTA TCCGCTGGTC
GATGATCTGG AGCGTTTTTA TGGTCATCTG GAACAAACGC TGCTGGCAAC CGGTTTTATC
CGTGAAAACC ATCCGGGGCA GGTGATGAAT AAATTGCGCC GTCTGTTTAC CCGTGCGCGC
CCGGAAAGCC AGGAATTGAA TATCCTGCGC GGGATTCTGG CTTCTATAGA GCAGCAGAAT
AAAGGTAATA AGACCGAATA A
 
Protein sequence
MLQNIRIVLV ETSHTGNMGS VARAMKTMGL TNLWLVNPLV KPDSQAIALA AGASDVIGNA 
HIVDTLDEAL AGCSLVVGTS ARSRTLPWPM LDPRECGLKS VAEAANTPVA LVFGRERVGL
TNEELQKCHY HVAIAANPEY SSLNLAMAVQ VIAYEVRMAW LATQENGEQV EHEETPYPLV
DDLERFYGHL EQTLLATGFI RENHPGQVMN KLRRLFTRAR PESQELNILR GILASIEQQN
KGNKTE