Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1140 |
Symbol | |
ID | 6068050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1244027 |
End bp | 1244917 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641600556 |
Product | DNA-binding transcriptional regulator HcaR |
Protein accession | YP_001724134 |
Protein GI | 170019180 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTAC GGCATTTACG CTATTTCGTC GCAGTGGCGC AGGCACTGAA CTTTACCCGT GCGGCGGAAA AACTGCATAC CTCACAGCCT TCGTTAAGCA GCCAGATCCG CGATCTTGAA AACTGTGTCG GTGTTCCGTT ACTGGTGAGG GATAAGCGCA AAGTCGCGTT GACGGCGGCG GGAGAATGTT TTCTCCAGGA CGCGCTGGCA ATCCTCGAAC AAGCGGAAAA TGCCAAATTA CGGGCGCGGA AAATTGTTCA GGAAGACAGA CAATTAACCA TTGGCTTTGT GCCATCGGCG GAAGTGAATT TATTGCCAAA AGTATTACCG ATGTTTCGTC TCAGACAGCC AGACACCTTG ATTGAGCTGG TGAGTTTAAT CACCACGCAA CAGGAGGAAA AAATTCGCCG TGGTGAACTC GACGTCGGCT TAATGCGCCA TCCTGTTTAT AGCCCGGAGA TTGATTATCT GGAGCTTTTT GACGAACCAT TAGTGGTGGT GTTACCGGTT GATCACCCTT TAGCACATGA AAAAGAGATC ACCGCCGCGC AACTGGATGG CGTGAATTTC GTCAGTACCG ATCCGGCGTA TTCCGGTTCG CTTGCGCCGA TCGTTAAAGC GTGGTTTGCG CAAGAAAACA GCCAGCCAAA TATCGTCCAG GTGGCAACGA ATATTCTGGT GACCATGAAT CTGGTGGGCA TGGGGCTGGG CGTCACTTTG ATACCCGGTT ATATGAATAA TTTTAATACC GGGCAGGTTG TTTTTCGTCC CATTGCCGGA AATGTGCCTT CCATTGCTTT ACTGATGGCG TGGAAGAAAG GGGAGATGAA GCCGGCATTA CGCGATTTCA TCGCCATTGT GCAGGAACGT TTGGCAAGCG TAACGGCATA A
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Protein sequence | MELRHLRYFV AVAQALNFTR AAEKLHTSQP SLSSQIRDLE NCVGVPLLVR DKRKVALTAA GECFLQDALA ILEQAENAKL RARKIVQEDR QLTIGFVPSA EVNLLPKVLP MFRLRQPDTL IELVSLITTQ QEEKIRRGEL DVGLMRHPVY SPEIDYLELF DEPLVVVLPV DHPLAHEKEI TAAQLDGVNF VSTDPAYSGS LAPIVKAWFA QENSQPNIVQ VATNILVTMN LVGMGLGVTL IPGYMNNFNT GQVVFRPIAG NVPSIALLMA WKKGEMKPAL RDFIAIVQER LASVTA
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