Gene EcolC_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1135 
Symbol 
ID6068037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1239674 
End bp1240876 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content54% 
IMG OID641600551 
Productphenylpropionate dioxygenase ferredoxin reductase subunit 
Protein accessionYP_001724129 
Protein GI170019175 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA AAACGATCAT TATTGTCGGT GGCGGGCAAG CGGCGGCAAT GGCTGCGGCC 
TCGCTACGCC AGCAAGGGTT CACCGGTGAG CTGCATCTGT TTTCCGATGA GCGACATCTT
CCTTATGAAC GACCTCCACT CTCGAAATCC ATGTTGCTGG AAGATTCCCC GCAGTTACAG
CAGGTGTTAC CCGCTAACTG GTGGCAGGAA AACAATGTTC ATCTGCATTC CGGTGTAACC
ATCAAAACGC TGGGTCGCGA CACACGAGAG TTAGTGTTAA CCAACGGCGA AAGCTGGCAC
TGGGATCAGC TTTTTATAGC AACCGGCGCG GCAGCTCGAC CGCTGCCGTT GCTTGATGCA
CTGGGAGAAC GCTGCTTTAC CCTACGCCAT GCCGGTGATG CCGCCAGACT GCGAGAAGTT
CTGCAGCCCG AACGGTCAGT CGTGATTATC GGTGCCGGAA CTATTGGTCT GGAACTGGCT
GCCAGCGCCA CGCAGCGCAG ATGTAAGGTG ACAGTGATTG AACTGGCGGC AACCGTCATG
GGCCGTAATG CACCACCGCC CGTGCAACGC TATCTTTTAC AGCGCCACCA GCAGGCTGGT
GTGCGTATTC TGCTCAATAA TGCCATTGAA CATGTGGTCG ATGGTGAAAA AGTAGAACTG
ACGCTGCAAA GTGGGGAAAC GCTTCAGGCT GATGTGGTGA TTTACGGTAT TGGTATCAGC
GCCAACGAGC AACTGGCTCG CGAGGCCAAC CTTGATACTG CCAATGGCAT TGTCATTGAT
GAGGCTTGCC GCACCTGCGA TCCCGCGATC TTTGCCGGTG GCGATGTGGC AATCACTCGT
CTTGATAATG GTGCACTACA CCGCTGCGAA AGCTGGGAAA ACGCCAATAA CCAGGCGCAA
ATTGCCGCTG CCGCAATGTT AGGGCTACCG CTACCGCTAC TGCCGCCGCC GTGGTTCTGG
AGCGATCAGT ACAGTGATAA CTTACAGTTT ATTGGCGATA TGCGTGGCGA TGACTGGCTT
TGTCGTGGCA ACCCGGAAAC TCAGAAGGCG ATTTGGTTTA ATCTGCAAAA CGGCGTGCTT
ATCGGTGCGG TCACGCTGAA TCAGGGGCGT GAGATTCGCC CAATTCGCAA ATGGATCCAG
AGCGGCAAAA CGTTTGATGC GAAACTGCTG ATAGATGAGA ACATCGCGCT TAAATCACTG
TAA
 
Protein sequence
MKEKTIIIVG GGQAAAMAAA SLRQQGFTGE LHLFSDERHL PYERPPLSKS MLLEDSPQLQ 
QVLPANWWQE NNVHLHSGVT IKTLGRDTRE LVLTNGESWH WDQLFIATGA AARPLPLLDA
LGERCFTLRH AGDAARLREV LQPERSVVII GAGTIGLELA ASATQRRCKV TVIELAATVM
GRNAPPPVQR YLLQRHQQAG VRILLNNAIE HVVDGEKVEL TLQSGETLQA DVVIYGIGIS
ANEQLAREAN LDTANGIVID EACRTCDPAI FAGGDVAITR LDNGALHRCE SWENANNQAQ
IAAAAMLGLP LPLLPPPWFW SDQYSDNLQF IGDMRGDDWL CRGNPETQKA IWFNLQNGVL
IGAVTLNQGR EIRPIRKWIQ SGKTFDAKLL IDENIALKSL