| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1053 |
|---|
| Symbol | |
|---|
| ID | 6066280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1146686 |
|---|
| End bp | 1149019 |
|---|
| Gene Length | 2334 bp |
|---|
| Protein Length | 777 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641600465 |
|---|
| Product | P4 family phage/plasmid primase |
|---|
| Protein accession | YP_001724047 |
|---|
| Protein GI | 170019093 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3378] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA ACGTAACCGC CACCGTCAGC CATGCGCTCG GCCACTGGCC GCGTATTCTC
CCGGCGCTGG GGATTCAGGT GCTGAAAAAC CGTCATCAGC CCTGTCCGGT CTGTGGCGGG
AGTGACCGCT TCCGTTTTGA TGACAGGGAG GGGCGCGGCA CCTGGTACTG CAATCAGTGT
GGTGCCGGTG ACGGCCTGAA ACTGGTTGAA AAGGTGTTTG GTGTCTCCCC GTCCGACGCG
GCCACAAAGG TGGCTGCCGT GACCGGCAGC CTGCCCCCGG CTGACCCGGC AGTGACGGCC
GCCGCCGGTG CTGAAACAGA CGCTGCCCGG AAGAACGCCG CCGCACTGGC ACAAACCCTG
ATGGCGAAAA CCCGTCCCGG AACCGGTAAC GCCTACCTGA CCCGCAAGGG CTTTCCCGGC
CGGGAATGCC GGATGCTGAC CGGCACACAC AGAGCCGGTG GCGTGAGCTG GCGCGCCGGT
GACCTTGTGG TGCCACTGTA TGACGACAGC GGCGAACTGG TTAACCTTCA GTTAATCAGT
GCTGACGGCC GTAAGCGCAC CCTGAAAGGC GGACAGGTCA GGGGCACCTG TCACATCCTT
GAAGGACAGA ATCAGGCCGG AAAACGTCTG TGGATAGCGG AGGGATACGC GACCGCACTT
ACCGTGCATC ACCTGACCGG TGAAACGGTG ATGGTGGCGC TTTCTTCCGT GAACCTCCTT
TCTCTGGCCA GCCTTGCCCG GCAGAAGCAC CCCGCCTGTC AGATTGTCCT TGCCGCTGAC
CGTGACCTCA GCGGTGACGG CCAGAAAAAA GCCGCCGCAG CCGCAGATGC GTGTGAAGGT
GTTGTTGCCC TGCCGCCGGT CTTCGGTGAC TGGAATGATG CCTTCACGCA GTACGGCGGG
GAGGCCACCC GTAAGGCCAT TTACGATGCC ATCCGGCCAC CGGCTGAAAG CCCGTTCGAC
ACCATGAGCG AAGCGGAGTT TTCCGCCATG AGTACCAGCG AAAAGGCCAT GCGTATCTAT
GAGCATTACG GCGAGGCGCT CGCGGTCGAT GCCAACGGCC AGCTTCTGTC CCGTTATGAA
AATGGTGTCT GGAAGGTGCT GCCACCACAG GACTTTGCCC GGGATGTGGC CGGGCTGTTT
CAGCGGCTGC GTGCGCCGTT CTCCTCCGGG AAGGTGGCCT CCGTGGTGGA CACCCTGAAG
CTGATTATTC CGCAGCAGGA AGCCCCCTCC CGCTGCCTGA TTGGCTTTCG TAACGGCGTG
CTCGACACGC AGAACGGCAC GTTCCACCCG CACAGTCCGT CACACTGGAT GCGCACCCTG
TGTGATGTGG ATTTCACCCC GCCAGTGGAA GGGGAAACGC TGGAAACCCA CGCCCCCGCG
TTCTGGCGCT GGCTTGACCG TGCCGCCGGT GGCCGTGCGG AAAAACGCGA CGTGATTCTG
GCCGCACTGT TTATGGTGCT GGCAAACCGC TACGACTGGC AGCTCTTTCT GGAGGTGACC
GGTCCCGGCG GCAGCGGCAA AAGTATCATG GCCGAAATAG CCACCCTGCT GGCCGGGGAG
GATAACGCCA CGTCGGCCAC CATCGAGACG CTGGAATCCC CGCGTGAACG TGCCGCGTTA
ACTGGCTTCT CACTGATACG CCTGCCGGAC CAGGAAAAAT GGAGCGGCGA CGGAGCCGGA
CTCAAGGCCA TCACCGGCGG CGATGCGGTG TCCGTTGACC CGAAATACCG GGATGCGTAC
TCCACGCACA TCCCGGCGGT AATTCTGGCC GTGAACAATA ACCCGATGCG CTTCACCGAC
CGCAGCGGCG GCGTGTCACG CCGGCGGGTG ATTATTCACT TCCCGGAACA GATAGCCCCG
CAGGAGCGCG ACCCGCAGCT TAAGGACAAA ATCACCCGCG AGCTGGCGGT CATCGTGCGT
CACCTGATGC AGAAATTCAG CGACCCGATG CTCGCCCGGT CACTGCTTCA GTCCCAGCAA
AACTCAGACG AGGCGCTGAA CATCAAACGG GATGCCGACC CGACGTTTGA TTTTATCGGC
TATCTGGAAA CCCTGCCGCA GACCAGCGGC ATGTATATGG GGAACGCCAG TATCATCCCG
CGTAATTACC GTAAATACCT CTATCACGCC TATCTGGCCT ACATGGAGGC AAACGGCTAC
CGGAACGTAC TCAGTCTGAA AATGTTCGGG CTGGGGCTAC CGGTGATGCT GAAGGAATAC
GGACTGAATT ACGAGAAGCG CCATACCAAA CAGGGGATAC AGACCAACCT GACACTGAAA
GAGGAAAGCT ACGGCGACTG GCTGCCGAAA TGTGACGACC CTGCAACAGC CTGA
|
|---|
| Protein sequence | MKMNVTATVS HALGHWPRIL PALGIQVLKN RHQPCPVCGG SDRFRFDDRE GRGTWYCNQC
GAGDGLKLVE KVFGVSPSDA ATKVAAVTGS LPPADPAVTA AAGAETDAAR KNAAALAQTL
MAKTRPGTGN AYLTRKGFPG RECRMLTGTH RAGGVSWRAG DLVVPLYDDS GELVNLQLIS
ADGRKRTLKG GQVRGTCHIL EGQNQAGKRL WIAEGYATAL TVHHLTGETV MVALSSVNLL
SLASLARQKH PACQIVLAAD RDLSGDGQKK AAAAADACEG VVALPPVFGD WNDAFTQYGG
EATRKAIYDA IRPPAESPFD TMSEAEFSAM STSEKAMRIY EHYGEALAVD ANGQLLSRYE
NGVWKVLPPQ DFARDVAGLF QRLRAPFSSG KVASVVDTLK LIIPQQEAPS RCLIGFRNGV
LDTQNGTFHP HSPSHWMRTL CDVDFTPPVE GETLETHAPA FWRWLDRAAG GRAEKRDVIL
AALFMVLANR YDWQLFLEVT GPGGSGKSIM AEIATLLAGE DNATSATIET LESPRERAAL
TGFSLIRLPD QEKWSGDGAG LKAITGGDAV SVDPKYRDAY STHIPAVILA VNNNPMRFTD
RSGGVSRRRV IIHFPEQIAP QERDPQLKDK ITRELAVIVR HLMQKFSDPM LARSLLQSQQ
NSDEALNIKR DADPTFDFIG YLETLPQTSG MYMGNASIIP RNYRKYLYHA YLAYMEANGY
RNVLSLKMFG LGLPVMLKEY GLNYEKRHTK QGIQTNLTLK EESYGDWLPK CDDPATA
|
|---|
| |