Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1031 |
Symbol | |
ID | 6066721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1120678 |
End bp | 1122783 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641600444 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_001724027 |
Protein GI | 170019073 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.578338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTACC ACGCGCTGAA TGCGATGCTT AACCTCTACG ATAGCGCAGG TCGCATTCAG TTCGATAAAG ACCGCCAGGC CGTTGACGCC TTTATTGCGA CGCATGTGCG TCCGAACAGT GTGACCTTCA GTAGCCAGCA GCAGCGCCTG AACTGGCTGG TCAACGAAGG TTACTATGAT GAAAGCGTTC TTAATCGCTA CTCTCGCGAC TTTGTCATTA CGCTGTTTGC CCACGCACAC ACCAGCGGTT TTCGTTTCCA GACATTCCTC GGGGCATGGA AGTTTTACAC CAGCTATACG TTGAAGACAT TCGACGGTAA ACGTTATCTG GAAGATTTTG CCGATCGAGT CACGATGGTG GCGCTGACGC TGGCACAAGG CGATGAGACG CTGGCGTTGC AACTGACAGA TGAAATGCTG TCAGGACGCT TTCAGCCAGC CACGCCAACA TTCCTCAACT GCGGTAAGCA GCAGCGCGGC GAACTGGTTT CCTGTTTTTT GCTGCGTATT GAAGACAATA TGGAGTCGAT TGGTCGGGCG GTAAATTCCG CACTGCAACT GTCGAAACGC GGCGGCGGCG TAGCATTTTT GCTGTCGAAT CTGCGAGAAG CGGGCGCGCC AATTAAACGT ATTGAAAATC AATCTTCTGG CGTAATTCCG GTGATGAAAA TGCTGGAAGA CGCATTTTCC TATGCCAACC AACTCGGCGC TCGTCAGGGG GCTGGTGCAG TCTATTTACA TGCTCATCAT CCCGATATTC TGCGTTTTCT CGACACGAAA CGGGAAAATG CCGACGAAAA AATCCGCATT AAAACACTGT CGCTTGGCGT GGTGATCCCG GATATCACTT TCCATCTGGC AAAAGAGAAT GCGCAGATGG CGCTGTTTTC GCCTTATGAC GTAGAGCGAG TTTATGGCAA GCCGTTTGCC GATGTGGCCA TCAGCCAACA CTATGACGAA CTGGTTGCCG ATGAACGCAT TCGCAAAAAA TACCTCAACG CCCGTGATTT CTTCCAGCGA CTGGCAGAAA TCCAGTTTGA GTCCGGCTAT CCCTACATCA TGTATGAAGA CACGGTAAAC CGTGCTAACC CTATCGCCGG GCGCATAAAT ATGAGTAATC TCTGCTCAGA AATTTTGCAG GTTAACAGCG CCTCAGAGTA TGACGAGAAT CTCGACTATA CCCGCACAGG CCATGATATT TCCTGCAATT TAGGTTCGTT GAATATTGCG CACACCATGG ATTCCCCCGA TTTTGCCCGC ACGGTAGAGA CTGCCGTGCG CGGTTTAACG GCAGTATCAG ATATGAGTCA TATCCGCAGC GTGCCGTCCA TCGAAGCCGG AAATGCCGCC TCGCACGCCA TCGGACTGGG GCAGATGAAT TTACACGGCT ATCTGGCGCG AGAAGGCATC GCTTATGGTT CGCCGGAAGC ACTGGATTTC ACCAATCTCT ATTTCTATGC CATCACCTGG CATGCACTGC GTACCTCGAT GTTGCTGGCA CGCGAACGCG GTGAAACCTT CGCCGGGTTC AAACAGTCAC GCTATGCCAG TGGTGAATAT TTTAGCCAAT ATCTGCAAGG GAACTGGCAG CCGAAAACGG CGAAAGTTGG CGAACTGTTT ACCCGTAGCG GTATTACGTT ACCTACCCGT GAGATGTGGG CGCAGCTGCG CGACGACGTG ATGCGCTACG GCATATACAA CCAGAATCTT CAGGCGGTGC CGCCAACCGG TTCTATCTCT TATATCAACC ATGCTACGTC GAGTATTCAT CCGATTGTGG CGAAAGTAGA GATACGCAAA GAGGGCAAAA CAGGACGCGT TTACTACCCT GCCCCGTTTA TGACTAACGA GAATCTGGCG CTGTATCAGG ACGCTTACGA AATTGGCGCA GAAAAGATCA TCGACACCTA CGCGGAAGCG ACTCGCCATG TCGATCAGGG GCTGTCGCTG ACGCTTTTTT TCCCCGATAC CGCCACCACT CGCGATATCA ACAAAGCGCA GATTTACGCC TGGCGCAAGG GTATCAAAAC GCTCTATTAC ATCCGCCTGC GTCAGATGGC GCTGGAAGGC ACTGAAATTG AAGGCTGCGT CTCCTGTGCA CTTTAA
|
Protein sequence | MDYHALNAML NLYDSAGRIQ FDKDRQAVDA FIATHVRPNS VTFSSQQQRL NWLVNEGYYD ESVLNRYSRD FVITLFAHAH TSGFRFQTFL GAWKFYTSYT LKTFDGKRYL EDFADRVTMV ALTLAQGDET LALQLTDEML SGRFQPATPT FLNCGKQQRG ELVSCFLLRI EDNMESIGRA VNSALQLSKR GGGVAFLLSN LREAGAPIKR IENQSSGVIP VMKMLEDAFS YANQLGARQG AGAVYLHAHH PDILRFLDTK RENADEKIRI KTLSLGVVIP DITFHLAKEN AQMALFSPYD VERVYGKPFA DVAISQHYDE LVADERIRKK YLNARDFFQR LAEIQFESGY PYIMYEDTVN RANPIAGRIN MSNLCSEILQ VNSASEYDEN LDYTRTGHDI SCNLGSLNIA HTMDSPDFAR TVETAVRGLT AVSDMSHIRS VPSIEAGNAA SHAIGLGQMN LHGYLAREGI AYGSPEALDF TNLYFYAITW HALRTSMLLA RERGETFAGF KQSRYASGEY FSQYLQGNWQ PKTAKVGELF TRSGITLPTR EMWAQLRDDV MRYGIYNQNL QAVPPTGSIS YINHATSSIH PIVAKVEIRK EGKTGRVYYP APFMTNENLA LYQDAYEIGA EKIIDTYAEA TRHVDQGLSL TLFFPDTATT RDINKAQIYA WRKGIKTLYY IRLRQMALEG TEIEGCVSCA L
|
| |