Gene EcolC_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1025 
Symbol 
ID6066785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1113709 
End bp1114446 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content53% 
IMG OID641600438 
ProductAzlC family protein 
Protein accessionYP_001724021 
Protein GI170019067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0836238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCC CTACTCCACA GCCTGCTCCT GGTTCGGCGA CCTTCATGGA AGGATGCAAA 
GACAGTTTAC CGATTGTTAT TAGTTATATT CCGGTGGCCT TTGCGTTCGG TCTGAATGCG
ACCCGTCTGG GATTCTCTCC TCTCGAAAGC GTTTTTTTCT CCTGCATCAT TTATGCAGGC
GCGAGCCAGT TCGTCATTAC CGCGATGCTG GCAGCCGGGA GTAGTTTGTG GATTGCTGCA
CTGACCGTCA TGGCAATGGA TGTTCGCCAT GTGTTGTATG GCCCGTCACT GCGTAGCCGT
ATTATTCAGC GTCTGCAAAA ATCGAAAACC GCCCTGTGGG CGTTTGGCCT GACGGATGAG
GTTTTTGCCG CCGCAACCGC AAAACTGGTA CGCAATAATC GCCGCTGGAG CGAGAACTGG
ATGATCGGCA TTGCCTTCAG TTCATGGTCA TCGTGGGTAT TTGGTACGGT AATAGGGGCA
TTCTCCGGCA GCGGCTTGCT GCAAGGTTAT CCCGCCGTTG AAGCTGCATT AGGTTTTATG
CTTCCGGCAC TCTTTATGAG TTTCCTGCTC GCCTCTTTCC AGCGCAAACA ATCTCTTTGC
GTTACCGCAG CGTTAGTTGG TGCCCTTGCA GGCGTAACGC TATTTTCTAT TCCCGTCGCC
ATTCTGGCAG GCATTGTCTG TGGCTGCCTC ACTGCGTTAA TCCAGGCATT CTGGCAAGGA
GCGCCCGATG AGCTATGA
 
Protein sequence
MESPTPQPAP GSATFMEGCK DSLPIVISYI PVAFAFGLNA TRLGFSPLES VFFSCIIYAG 
ASQFVITAML AAGSSLWIAA LTVMAMDVRH VLYGPSLRSR IIQRLQKSKT ALWAFGLTDE
VFAAATAKLV RNNRRWSENW MIGIAFSSWS SWVFGTVIGA FSGSGLLQGY PAVEAALGFM
LPALFMSFLL ASFQRKQSLC VTAALVGALA GVTLFSIPVA ILAGIVCGCL TALIQAFWQG
APDEL