Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1001 |
Symbol | |
ID | 6067699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1089017 |
End bp | 1090150 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641600409 |
Product | nitric oxide reductase |
Protein accession | YP_001723997 |
Protein GI | 170019043 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0544101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00016497 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAACG GCATTGTGAT CATCGGTTCG GGCTTCGCCG CCCGCCAACT GGTGAAAAAT ATTCGCAAAC AGGACGCCAC TATTCCATTA ACCCTGATTG CCGCCGACAG CATGGATGAG TACAACAAAC CTGACCTCAG CCATGTTATC AGTCAGGGGC AACGTGCCGA TGACCTTACC CGCCAGACGG CGGGTGAATT TGCCGAGCAG TTTAATCTGC ACCTGTTTCC ACAAACCTGG GTGACGGATA TCGATGCCGA AGCCCGTGTG GTGAAAAGCC AGAATAATCA GTGGCAATAC GACAAGCTAG TACTGGCAAC CGGTGCCAGT GCCTTTGTCC CGCCTGTGCC TGGGCGTGAG TTAATGCTGA CGTTAAATAG TCAGCAAGAG TATCGCGCCT GTGAAACGCA ACTGCGGGAT GCCCGACGCG TGTTGATTGT TGGCGGTGGT TTGATTGGTA GCGAACTGGC GATGGATTTT TGTCGTGCAG GCAAAGCGGT CACGCTAATC GACAACGCTG CCAGTATTCT GGCGTCGTTA ATGCCACCGG AAGTAAGCAG CCGCTTGCAG CATCGGTTGA CGGAGATGGG CGTTCATCTG CTGTTGAAAT CTCAGTTACA GGGGCTGGAA AAAACGGATT CTGGCATTCA GGCAACGCTG GACCGCCAGC GCAATATCGA AGTGGATGCG GTAATTGCCG CCACCGGACT GCGCCCGGAA ACCGCCCTGG CACGACGCGC CGGGCTGACG ATTAATCGCG GCGTTTGCGT CGATAGTTAT CTGCAAACCA GTAATACCGA TATTTACGCG CTGGGCGATT GCGCGGAAAT TAACGGTCAG GTATTGCCGT TCCTCCAGCC GATTCAACTT AGCGCGATGG TGCTGGCAAA AAATCTTCTC GGCAATAACA CGCCGCTGAA ACTCCCGGCG ATGCTGGTGA AAATCAAAAC GCCGGAATTA CCGCTGCATC TGGCAGGCGA AACCCAGCGT CAGGATTTAC GCTGGCAAAT TAATACCGAA CGCCAGGGAA TGGTGGCGCG CGGCGTTGAC GATGCTGACC AGCTTCGCGC CTTTGTGGTC AGTGAGGATC GGATGAAAGA GGCATTTGGA TTGTTGAAAA CATTGCCGAT GTAG
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Protein sequence | MSNGIVIIGS GFAARQLVKN IRKQDATIPL TLIAADSMDE YNKPDLSHVI SQGQRADDLT RQTAGEFAEQ FNLHLFPQTW VTDIDAEARV VKSQNNQWQY DKLVLATGAS AFVPPVPGRE LMLTLNSQQE YRACETQLRD ARRVLIVGGG LIGSELAMDF CRAGKAVTLI DNAASILASL MPPEVSSRLQ HRLTEMGVHL LLKSQLQGLE KTDSGIQATL DRQRNIEVDA VIAATGLRPE TALARRAGLT INRGVCVDSY LQTSNTDIYA LGDCAEINGQ VLPFLQPIQL SAMVLAKNLL GNNTPLKLPA MLVKIKTPEL PLHLAGETQR QDLRWQINTE RQGMVARGVD DADQLRAFVV SEDRMKEAFG LLKTLPM
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