| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1000 |
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| Symbol | |
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| ID | 6067708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1086637 |
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| End bp | 1088889 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641600408 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001723996 |
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| Protein GI | 170019042 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000948603 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAAA ACACATCTTG CGGTGTCCAA CTGCGTATTC GTGGCAAAGT GCAGGGCGTC
GGTTTTCGTC CGTTTGTCTG GCAGCTGGCA CAGCAATTAA ATCTTCACGG CGATGTCTGT
AATGACGGCG ATGGCGTAGA AGTCCGGCTG CGGGAAGACC CGGAAACGTT TCTTGTTCAA
TTGTATCAGC ACTGCCCGCC GCTGGCGCGT ATTGATAGCG TCGAGCGTGA GCCGTTTATC
TGGTCACAAC TGCCCACCGA GTTCACTATA CGCCAGAGCA CAGGCGGCAC CATGAATACG
CAAATTGTTC CCGATGCCGC TACTTGCCCT GCTTGCCTTG CCGAAATGAA TACCCCAGGC
GAACGGCGTT ATCGTTATCC GTTTATCAAC TGTACCCACT GCGGCCCGCG TTTCACCATT
ATTCGCGCCA TGCCTTACGA CCGCCCGTTT ACCGTGATGG CGGCGTTTCC GCTATGTCCG
GCCTGTGACA AAGAGTACCG TGACCCGCTC GATCGTCGCT TCCACGCCCA GCCGGTGGCC
TGCCCGGAGT GTGGCCCGCA TCTTGAATGG GTAAGTCATG GTGAACATGC GGAACAAGAG
GCGGCATTAC AGGCAGCTAT CGCACAGTTA AAAATGGGCA AAATTGTCGC CATCAAAGGG
ATTGGCGGAT TTCATCTTGC CTGCGATGCA CGTAACAGTA ACGCGGTGGC GACACTTCGG
GCGCGCAAAC ATCGCCCGGC GAAACCGCTG GCGGTCATGT TGCCAGTGGC TGACGGTTTA
CCAGACGCTG CGCGCCAGTT GCTTACCACG CCCGCCGCGC CGATTGTGCT GGTGGATAAA
AAATACGTTC CTGAGCTTTG TGATGATATC GCCCCTGACC TTAACGAAGT CGGGGTAATG
TTGCCTGCGA ACCCGCTCCA GCATTTGCTG TTACAGGAAC TGCAATGCCC GCTGGTGATG
ACCTCCGGCA ACCTGAGCGG TAAACCACCA GCTATCAGCA ACAAACAGGC GCTGGCGGAT
TTGCAGGGCA TTGCCGACGG ATTTTTGATA CATAACCGCG ACATCGTGCA GCGGATGGAT
GATTCGGTGG TGCGCGAAAG CGGCGAAATG CTGCGCCGTT CGCGGGGGTA TGTGCCGGAT
GCGCTGGCTT TGCCTCCGGG CTTTAAAAAT GTTCCGCCTG TGCTGTGTCT CGGCGCGGAT
CTGAAAAATA CCTTCTGCCT GGTGCGCGGT GAACAAGCGG TGTTGAGTCA GCATCTGGGC
GATTTAAGTG ACGATGGCAT CCAGATGCAG TGGCGCGAAG CGTTACGCCT GATGCAAAAC
ATCTACGATT TCACCCCGCA ATACGTTGTG CATGACGCAC ATCCGGGCTA TGTCTCCAGC
CAGTGGGCGC GCGAAATGAA TCTGCCGACG CAAACGGTGC TGCATCATCA TGCCCACGCA
GCGGCGTGTC TGGCAGAGCA TCAGTGGCCG CTGGATGGCG GTGATGTCAT TGCTTTGACG
CTCGACGGTA TCGGTATGGG GGAGAATGGC GCTTTGTGGG GCGGCGAGTG CCTGCGGGTG
AACTATCGCG AATGTGAGCA CCTGGGCGGC TTGCCTGCAG TGGCGCTTGC TGGTGGCGAT
TTGGCGGCGA AGCAGCCGTG GCGAAACCTG CTGGCGCAGT GCCTGCGTTT TGTGCCGGAG
TGGCAGAATT ATCCCGAAAC AGCGAGTGTG CAACAGCAAA ACTGGAGCGT GCTGGCGCGG
GCCATTGAGC GTGGAATTAA CGCGCCGCTG GCGTCATCGT GTGGGCGTTT TTTCGATGCA
GTGGCGGCGG CACTGGGCTG TGCGCCAGCC ACGTTAAGTT ATGAAGGTGA AGCGGCTTGT
GCTCTGGAGG CGCTCGCAGC CTCATGCCAC GGAGTGACGC ATCCGGTGAC AATGCCGCGG
GTGGACAATC AACTGGATCT CGCCACTTTC TGGCAGCAGT GGCTGAACTG GCAGGCACCG
GTTAATCAAC GCGCGTGGGC GTTTCATGAT GCGCTGGCGC AGGGTTTTGC CGCGTTGATG
CGTGAGCAGG CCACGATGCG TGGTATCACT ACGCTGGTAT TTAGCGGCGG GGTTATTCAT
AACCGTTTGC TGCGTGCACG TCTGGCGCAT TATCTCGCTG ATTTCACATT GCTCTTTCCA
CAGAGTTTAC CGGCGGGTGA TGGCGGTTTG TCTCTGGGGC AGGGGGTTAT TGCTGCGGCG
CGTTGGTTAG CGGGTGAAGT CCAGAACGGA TAA
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| Protein sequence | MAKNTSCGVQ LRIRGKVQGV GFRPFVWQLA QQLNLHGDVC NDGDGVEVRL REDPETFLVQ
LYQHCPPLAR IDSVEREPFI WSQLPTEFTI RQSTGGTMNT QIVPDAATCP ACLAEMNTPG
ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ACDKEYRDPL DRRFHAQPVA
CPECGPHLEW VSHGEHAEQE AALQAAIAQL KMGKIVAIKG IGGFHLACDA RNSNAVATLR
ARKHRPAKPL AVMLPVADGL PDAARQLLTT PAAPIVLVDK KYVPELCDDI APDLNEVGVM
LPANPLQHLL LQELQCPLVM TSGNLSGKPP AISNKQALAD LQGIADGFLI HNRDIVQRMD
DSVVRESGEM LRRSRGYVPD ALALPPGFKN VPPVLCLGAD LKNTFCLVRG EQAVLSQHLG
DLSDDGIQMQ WREALRLMQN IYDFTPQYVV HDAHPGYVSS QWAREMNLPT QTVLHHHAHA
AACLAEHQWP LDGGDVIALT LDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALAGGD
LAAKQPWRNL LAQCLRFVPE WQNYPETASV QQQNWSVLAR AIERGINAPL ASSCGRFFDA
VAAALGCAPA TLSYEGEAAC ALEALAASCH GVTHPVTMPR VDNQLDLATF WQQWLNWQAP
VNQRAWAFHD ALAQGFAALM REQATMRGIT TLVFSGGVIH NRLLRARLAH YLADFTLLFP
QSLPAGDGGL SLGQGVIAAA RWLAGEVQNG
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