Gene EcolC_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0955 
Symbol 
ID6068303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1042351 
End bp1043025 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content48% 
IMG OID641600363 
ProductCRISPR-associated Cas5 family protein 
Protein accessionYP_001723951 
Protein GI170018997 
COG category 
COG ID 
TIGRFAM ID[TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTT ATTTGATCTT GCGACTTGCT GGGCCAATGC AAGCCTGGGG GCAGCCGACC 
TTTGAAGGAA CGCGACCTAC CGGAAGATTT CCGACCCGAA GCGGGTTATT AGGGCTACTC
GGGGCTTGTC TTGGGATCCA ACGTGATGAT ACTTCTTCAT TACAGGCGTT ATCAGAGAGT
GTGCAATTTG CAGTGCGCTG CGATGAACTC ATTCTTGACG ATCGTCGTGT GTCTGTAACG
GGGTTGCGTG ATTACCATAC AGTCCTTGGA GCGCGAGAAG ATTACCGTGG TTTGAAAAGT
CATGAAACGA TTCAAACATG GCGCGAATAT TTATGTGATG CCTCCTTTAC CGTCGCTCTC
TGGTTAACAC CACAGGCAAC GATGGTTATG TCAGAACTTG AAAAAGCAGT ATTAAAGCCT
CGGTATACAC CGTATCTGGG GCGGAGGAGT TGTCCGCTAA CACAACCGCT TTTTCTCGGG
ACATGTCAGG CATCGGATCC TCAGAAGGTG CTATTAAATT ATGAGCCCGT TGGCGGCGAT
ATTTATAGTG AGGAATCAGT TGACGGGCAT CATTTAAAAT TTACGGTGCG CGACGAACCG
ATGATCACCT TGCCTCGACA ATTTGCTTCC CGAGAATGGT ATGTGATTAA AGGAGGTATG
GATGTATCTC AGTAA
 
Protein sequence
MRSYLILRLA GPMQAWGQPT FEGTRPTGRF PTRSGLLGLL GACLGIQRDD TSSLQALSES 
VQFAVRCDEL ILDDRRVSVT GLRDYHTVLG AREDYRGLKS HETIQTWREY LCDASFTVAL
WLTPQATMVM SELEKAVLKP RYTPYLGRRS CPLTQPLFLG TCQASDPQKV LLNYEPVGGD
IYSEESVDGH HLKFTVRDEP MITLPRQFAS REWYVIKGGM DVSQ