Gene EcolC_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0930 
Symbol 
ID6068523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1009639 
End bp1009950 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content46% 
IMG OID641600338 
Producttoxin ChpA 
Protein accessionYP_001723926 
Protein GI170018972 
COG category[T] Signal transduction mechanisms 
COG ID[COG2337] Growth inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000206991 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGATC TGATTTGGGT TGATTTTGAC CCGACAAAAG GTAGCGAGCA AGCTGGACAT 
CGTCCAGCTG TTGTCCTGAG TCCTTTCATG TACAACAACA AAACAGGTAT GTGTCTGTGT
GTTCCTTGTA CAACGCAATC AAAAGGATAT CCGTTCGAAG TTGTTTTATC CGGTCAGGAA
CGTGATGGCG TAGCGTTAGC TGATCAGGTA AAAAGTATCG CCTGGCGGGC AAGAGGAGCA
ACGAAGAAAG GAACAGTTGC CCCAGAGGAA TTACAACTCA TTAAAGCCAA AATTAACGTA
CTGATTGGGT AG
 
Protein sequence
MGDLIWVDFD PTKGSEQAGH RPAVVLSPFM YNNKTGMCLC VPCTTQSKGY PFEVVLSGQE 
RDGVALADQV KSIAWRARGA TKKGTVAPEE LQLIKAKINV LIG