Gene EcolC_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0904 
Symbol 
ID6068677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp978138 
End bp979055 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID641600311 
ProductDNA-binding transcriptional activator GcvA 
Protein accessionYP_001723900 
Protein GI170018946 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAC GATTACCACC GCTAAATGCC TTACGAGTTT TTGATGCCGC AGCACGCCAT 
TTAAGTTTCA CTCGCGCAGC AGAAGAGCTT TTTGTGACCC AAGCCGCAGT AAGTCATCAA
ATCAAGTCTC TTGAGGATTT TTTGGGGCTA AAACTGTTCC GCCGCCGTAA TCGTTCACTC
CTGCTGACCG AGGAAGGGCA AAGCTATTTC CTCGATATCA AAGAGATATT TTCGCAATTA
ACCGAAGCGA CGCGTAAACT CCAGGCCCGT AGCGCCAAGG GGGCGTTGAC GGTCAGTTTA
CTCCCCAGTT TCGCCATTCA TTGGTTGGTT CCGCGACTTT CCAGCTTTAA TTCAGCTTAT
CCGGGAATTG ACGTTCGAAT CCAGGCGGTT GATCGTCAGG AAGATAAGCT GGCGGATGAT
GTTGATGTGG CGATATTTTA TGGTCGGGGC AACTGGCCGG GGCTACGGGT GGAAAAACTG
TACGCCGAAT ATTTATTGCC GGTGTGTTCG CCGCTACTGC TGACTGGCGA AAAACCCTTG
AAGACACCGG AAGATCTGGC TAAACATACG TTATTACATG ATGCTTCGCG CCGTGACTGG
CAGACATATA CCCGACAGTT GGGGTTAAAT CATATCAACG TTCAGCAAGG GCCAATTTTT
AGCCATAGCG CCATGGTGCT GCAAGCGGCT ATCCACGGGC AGGGAGTGGC GCTGGCAAAT
AACGTGATGG CGCAATCTGA AATCGAGGCC GGACGTCTTG TTTGCCCGTT TAATGATGTT
CTGGTCAGTA AAAATGCTTT TTATCTGGTT TGTCATGACA GTCAGGCAGA ACTGGGTAAA
ATAGCCGCCT TTCGCCAATG GATCCTGGCG AAAGCCGCTG CTGAACAAGA AAAATTCCGC
TTTCGTTATG AACAATAA
 
Protein sequence
MSKRLPPLNA LRVFDAAARH LSFTRAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL 
LLTEEGQSYF LDIKEIFSQL TEATRKLQAR SAKGALTVSL LPSFAIHWLV PRLSSFNSAY
PGIDVRIQAV DRQEDKLADD VDVAIFYGRG NWPGLRVEKL YAEYLLPVCS PLLLTGEKPL
KTPEDLAKHT LLHDASRRDW QTYTRQLGLN HINVQQGPIF SHSAMVLQAA IHGQGVALAN
NVMAQSEIEA GRLVCPFNDV LVSKNAFYLV CHDSQAELGK IAAFRQWILA KAAAEQEKFR
FRYEQ