Gene EcolC_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0825 
Symbol 
ID6067212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp885658 
End bp886974 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content49% 
IMG OID641600230 
Productguanine deaminase 
Protein accessionYP_001723824 
Protein GI170018870 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID[TIGR02967] guanine deaminase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGAG AACACACGTT AAAAGCGGTA CGAGGCAGTT TTATTGATGT CACCCGTACG 
GTCGATAACC CGGAAGAGAT TGCCTCTGCG CTGCGGTTTA TTGAGGATGG TTTATTACTC
ATTAAACAGG GAAAAGTGGA ATGGTTTGGC GAATGGGAAG ACGGAAAGCA TCAAATTCCT
GACACTATTC GCGTGCGCGA CTATCGCGGC AAACTGATAG TACCGGGCTT TGTCGATACA
CATATCCATT ATCCGCAAAG TGAAATGGTG GGGGCCTATG GTGAACAATT GCTGGAGTGG
TTGAATAAAC ACACCTTCCC TACTGAACGT CGTTATGAGG ATTTAGAGTA CGCCCGCGAA
ATGTCGGCGT TCTTCATCAA GCAGCTTTTA CGTAACGGAA CCACCACGGC GCTGGTGTTT
GGCACTGTTC ATCCGCAATC CGTTGATGCG CTGTTTGAAG CCGCCAGTCA TATCAATATG
CGTATGATTG CCGGTAAGGT GATGATGGAC CGCAACGCAC CGGATTATCT GCTAGACACT
GCCGAAAGCA GCTATCACCA AAGCAAAGAA CTGATCGAAC GCTGGCACAA AAATGGTCGT
CTGTTGTATG CGATTACGCC ACGCTTCGCC CCTACCTCAT CTCCTGAACA GATGGCGATG
GCGCAACGCC TGAAAGAAGA ATATCCGGAT ACGTGGGTAC ATACCCATCT CTGTGAAAAC
AAAGATGAAA TTGCCTGGGT GAAATCGCTT TATCCTGACC ATGATGGTTA TCTGGATGTT
TACCATCAGT ACGGCCTGAC CGGTAAAAAC TGTGTCTTTG CTCACTGCGT CCATCTCGAA
GAAAAAGAGT GGGATCGTCT CAGCGAAACC AAATCCAGCA TTGCTTTCTG TCCGACCTCC
AACCTTTACC TCGGCAGCGG CTTATTCAAC TTGAAAAAAG CATGGCAGAA GAAAGTTAAA
GTGGGCATGG GAACGGATAT CGGTGCCGGA ACCACTTTCA ACATGCTGCA AACGCTGAAC
GAAGCCTACA AAGTGTTGCA ATTACAAGGC TATCGCCTCT CGGCATATGA AGCGTTTTAC
CTGGCCACGC TCGGCGGAGC GAAATCTCTG GGCCTTGACG ATTTGATTGG CAACTTTTTA
CCTGGCAAAG AGGCTGATTT CGTGGTGATG GAACCCACCG CCACTCCGCT ACAGCAGCTG
CGCTATGACA ACTCTGTTTC TTTAGTCGAC AAATTGTTCG TGATGATGAC GTTGGGCGAT
GACCGTTCGA TCTACCGCAC CTACGTTGAT GGTCGTCTGG TGTACGAACG CAACTAA
 
Protein sequence
MSGEHTLKAV RGSFIDVTRT VDNPEEIASA LRFIEDGLLL IKQGKVEWFG EWEDGKHQIP 
DTIRVRDYRG KLIVPGFVDT HIHYPQSEMV GAYGEQLLEW LNKHTFPTER RYEDLEYARE
MSAFFIKQLL RNGTTTALVF GTVHPQSVDA LFEAASHINM RMIAGKVMMD RNAPDYLLDT
AESSYHQSKE LIERWHKNGR LLYAITPRFA PTSSPEQMAM AQRLKEEYPD TWVHTHLCEN
KDEIAWVKSL YPDHDGYLDV YHQYGLTGKN CVFAHCVHLE EKEWDRLSET KSSIAFCPTS
NLYLGSGLFN LKKAWQKKVK VGMGTDIGAG TTFNMLQTLN EAYKVLQLQG YRLSAYEAFY
LATLGGAKSL GLDDLIGNFL PGKEADFVVM EPTATPLQQL RYDNSVSLVD KLFVMMTLGD
DRSIYRTYVD GRLVYERN