| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0734 |
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| Symbol | |
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| ID | 6068703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 786762 |
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| End bp | 788042 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641600139 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001723735 |
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| Protein GI | 170018781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.797641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATGA GTGAAAATGA TACAATCCCA AAGAAGTCTA CAAGTCAGAT TAACAAAGCG
GTATTCTTTA CATCTGCTTT GCTAATTTTC CTTCTTGTCG CCTTTGCCGC CGTATTCCCG
GATGTCGCCG ACAAAAATTT TAAACTACTT CAGCAACAAA TCTTCACGAA TGCCAGCTGG
TTCTACATCC TTGCTGTGGC CCTGATTTTA CTGAGTGTCA CGTTCCTTGG ACTCTCACGC
TACGGTGATA TCAAGCTGGG CCCGGACCAT GCGCAGCCTG ATTTCAGCTA CCACTCCTGG
TTTGCGATGC TTTTTTCGGC AGGGATGGGG ATCGGCCTGA TGTTCTTTGG CGTTGCCGAA
CCTGTAATGC ATTATCTTTC GCCACCCGTT GGCACTCCAG AAACCGTTGC GGCAGCTAAG
GAAGCAATGC GTCTGACCTT TTTCCACTGG GGACTGCACG CATGGGCAAT TTATGCCATT
GTGGCGCTGA TTCTGGCGTT CTTCAGTTAC CGTCACGGTC TGCCTTTAAC TCTGCGCTCC
GCACTCTATC CCATTATTGG CGATCGCATA TACGGACCTG TAGGACATGC GGTTGATATT
TTCGCTGTTA TAGGCACGGT CTTTGGCGTT GCGACATCAC TGGGTTACGG TGTTTTGCAG
GTGAATGCCG GTTTGAACCA TCTTTTCGGG GTGCCCATCA ATGAAACGGT GCAGGTAATT
CTGATCGTGG TCATCACGGG GTTAGCGACG ATTTCAGTGG TGTCCGGTCT GGATAAGGGA
ATACGTATCC TGTCTGAACT CAATCTGGGT CTGGCTTTGT TGCTCCTGGT GCTGGTCCTG
TGTCTGGGAC CAACCGTGCT TCTGCTGAAG TCATTTGTGG AAAATACGGG CGGTTATCTT
TCGGAACTGG TGAGTAAAAC GTTCAACCTT TACGCGTATG AGCCCAAGTC GAGCAACTGG
CTGGGGGGCT GGACATTACT GTACTGGGGA TGGTGGCTTT CATGGTCGCC GTTTGTGGGG
ATGTTCATCG CACGGGTCTC CCGCGGGCGA ACCATTCGCG AGTTTGTCAC CGGCGTGCTG
TTTGTTCCAG CGGGTTTTAC GCTAATGTGG ATGACGGTGT TTGGTAACAG CGCGATCTAT
CTCATTATGA ACCAGGGGGC CACAGACCTC GCCAATACTG TTCAGCAGGA TGTGTCGCTG
GCCCTGTTTA ATTTCCTGGA GCATTTCCCG TTCTCTTCTG TGCTGTCATT CATTGCAATG
GCGATGGTCA TCGTGGACTG A
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| Protein sequence | MIMSENDTIP KKSTSQINKA VFFTSALLIF LLVAFAAVFP DVADKNFKLL QQQIFTNASW
FYILAVALIL LSVTFLGLSR YGDIKLGPDH AQPDFSYHSW FAMLFSAGMG IGLMFFGVAE
PVMHYLSPPV GTPETVAAAK EAMRLTFFHW GLHAWAIYAI VALILAFFSY RHGLPLTLRS
ALYPIIGDRI YGPVGHAVDI FAVIGTVFGV ATSLGYGVLQ VNAGLNHLFG VPINETVQVI
LIVVITGLAT ISVVSGLDKG IRILSELNLG LALLLLVLVL CLGPTVLLLK SFVENTGGYL
SELVSKTFNL YAYEPKSSNW LGGWTLLYWG WWLSWSPFVG MFIARVSRGR TIREFVTGVL
FVPAGFTLMW MTVFGNSAIY LIMNQGATDL ANTVQQDVSL ALFNFLEHFP FSSVLSFIAM
AMVIVD
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