Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0575 |
Symbol | garR |
ID | 6064798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 617908 |
End bp | 618798 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641599982 |
Product | tartronate semialdehyde reductase |
Protein accession | YP_001723579 |
Protein GI | 170018625 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATGA AAGTTGGTTT TATTGGCCTG GGGATTATGG GTAAACCAAT GAGTAAAAAC CTTCTGAAAG CAGGTTACTC GCTGGTGGTT GCTGACCGTA ACCCAGAAGC TATTGCTGAC GTGATTGCTG CAGGTGCAGA AACAGCGTCT ACGGCTAAAG CGATCGCTGA ACAGTGCGAC GTCATCATAA CCATGCTGCC AAACTCCCCT CATGTGAAAG AGGTGGCGCT GGGTGAGAAT GGCATTATTG AAGGCGCGAA GCCAGGTACG GTATTGATCG ATATGAGTTC TATCGCACCG CTGGCAAGCC GTGAAATCAG CGAAGCGCTG AAAGCGAAAG GCATTGATAT GCTGGATGCT CCGGTGAGCG GCGGTGAACC GAAAGCCATC GACGGTACGC TGTCAGTGAT GGTGGGCGGC GACAAGGCTA TTTTCGACAA ATACTATGAT TTGATGAAAG CGATGGCGGG TTCCGTGGTG CATACCGGGG AAATCGGTGC AGGTAACGTC ACCAAACTGG CAAATCAGGT CATTGTGGCG CTGAATATTG CCGCGATGTC AGAAGCGTTA ACGCTGGCAA CTAAAGCGGG CGTTAACCCG GACCTGGTTT ATCAGGCAAT TCGCGGTGGA CTGGCGGGCA GTACCGTGCT GGATGCCAAA GCGCCGATGG TGATGGACCG CAACTTCAAG CCGGGCTTCC GTATTGATCT GCATATTAAG GATCTGGCGA ATGCGCTGGA TACTTCTCAC GGCGTCGGCG CACAACTGCC GCTCACAGCT GCGGTTATGG AGATGATGCA GGCACTGCGA GCAGATGGTT TAGGAACGGC GGATCATAGC GCCCTGGCGT GCTACTACGA AAAACTGGCG AAAGTCGAAG TTACTCGTTA A
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Protein sequence | MTMKVGFIGL GIMGKPMSKN LLKAGYSLVV ADRNPEAIAD VIAAGAETAS TAKAIAEQCD VIITMLPNSP HVKEVALGEN GIIEGAKPGT VLIDMSSIAP LASREISEAL KAKGIDMLDA PVSGGEPKAI DGTLSVMVGG DKAIFDKYYD LMKAMAGSVV HTGEIGAGNV TKLANQVIVA LNIAAMSEAL TLATKAGVNP DLVYQAIRGG LAGSTVLDAK APMVMDRNFK PGFRIDLHIK DLANALDTSH GVGAQLPLTA AVMEMMQALR ADGLGTADHS ALACYYEKLA KVEVTR
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