Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0548 |
Symbol | |
ID | 6064852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 591376 |
End bp | 591951 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641599955 |
Product | hypothetical protein |
Protein accession | YP_001723552 |
Protein GI | 170018598 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.496742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAT TATCGCCAAT CGCAGTCCTT ATTTCCGCGC TGCTGTTGCA AGGTTGTGTT GCCGCTGCCG TAGTGGGTAC CGCTGCTGTG GGTACCAAAG CCGCAACTGA CCCACGCAGT GTCGGCACCC AGGTGGACGA TGGTACCCTG GAAGTGCGCG TGAACAGCGC ATTGTCGAAA GACGAACAGA TTAAGAAAGA AGCGCGCATT AATGTAACGG CCTATCAGGG CAAAGTGCTG CTGGTTGGGC AGTCACCAAA TGCTGAACTT TCGGCTCGCG CCAAACAGAT TGCTATGGGC GTAGACGGTG CCAACGAAGT GTATAACGAG ATTCGTCAGG GCCAGCCGAT TGGTCTGGGC GAAGCATCTA ACGATACGTG GATCACCACC AAAGTGCGTT CGCAGCTCTT AACCAGCGAC CTGGTGAAAT CGTCCAACGT GAAAGTGACC ACCGAAAACG GTGAAGTGTT CCTGATGGGG CTGGTGACTG AACGTGAAGC GAAAGCGGCG GCAGATATTG CCAGCCGGGT GAGCGGCGTG AAGCGGGTAA CTACGGCGTT TACGTTTATT AAATAG
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Protein sequence | MKALSPIAVL ISALLLQGCV AAAVVGTAAV GTKAATDPRS VGTQVDDGTL EVRVNSALSK DEQIKKEARI NVTAYQGKVL LVGQSPNAEL SARAKQIAMG VDGANEVYNE IRQGQPIGLG EASNDTWITT KVRSQLLTSD LVKSSNVKVT TENGEVFLMG LVTEREAKAA ADIASRVSGV KRVTTAFTFI K
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